RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 LCNL1Q6ZST4 164 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 AMN1Q8IY45 258 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 ZNF418Q8TF45 676 aaPredicted RBP10.52□□□□□ -0.72
NPHP4-203ENST00000378169 RITA1Q96K30 269 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 CBY1Q9Y3M2 126 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 EYSQ5T1H1 3165 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 ATP5LO75964 103 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 HBDP02042 147 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 SMKR1H3BMG3 65 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 NDUFA3O95167 84 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 UTF1Q5T230 341 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 SP5Q6BEB4 398 aaPredicted RBP10.52□□□□□ -0.73
NPHP4-203ENST00000378169 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.73
NPHP4-203ENST00000378169 LAMTOR2Q9Y2Q5 125 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 PROP1O75360 226 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 C3orf79P0CE67 100 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 DSCR9P59020 149 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 IGHV1-69DA0A0B4J2H0 117 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-203ENST00000378169 IGHV1-69P01742 117 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
NPHP4-203ENST00000378169 SRSF8Q9BRL6 282 aaKnown RBP10.51□□□□□ -0.73
NPHP4-203ENST00000378169 TRAV9-2A0A087WT02 112 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 TDGF1P3P51864 188 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 CYB5R2Q6BCY4 276 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 LSM4Q9Y4Z0 139 aaKnown RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 TRBV19A0A075B6N1 114 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 CRXO43186 299 aaPredicted RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 LYPD1Q8N2G4 141 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 FASNP49327 2511 aaKnown RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 PAX1P15863 534 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 FAM120AOSQ5T036 256 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 F2Z2F3 143 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 OVOL1O14753 267 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 PPBPP02775 128 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
NPHP4-203ENST00000378169 LYRM7Q5U5X0 104 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 C9orf139Q6ZV77 190 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
NPHP4-203ENST00000378169 CFAP54Q96N23 3096 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 FAM181BA6NEQ2 426 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 UBE2L6O14933 153 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 RPL13AP40429 203 aaKnown RBP10.49□□□□□ -0.73
NPHP4-203ENST00000378169 SYNJ2BPP57105 145 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 TMEM249Q2WGJ8 235 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 FABP2P12104 132 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-203ENST00000378169 C19orf54Q5BKX5 351 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 TANC2Q9HCD6 1990 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 ADORA2A-AS1P86434 159 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 MORN5Q5VZ52 161 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 FAM110DQ8TAY7 271 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-203ENST00000378169 V9GYV3 84 aa10.49□□□□□ -0.73
NPHP4-203ENST00000378169 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
NPHP4-203ENST00000378169 E7EUB6 86 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 FXYD5Q96DB9 178 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 MTORP42345 2549 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 H7C1H1 209 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 PPP1R17O96001 155 aa10.48□□□□□ -0.73
NPHP4-203ENST00000378169 PDE6HQ13956 83 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
NPHP4-203ENST00000378169 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 A6NJY4 79 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 PRB1P04280 392 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 LINC01356Q8N9X3 169 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
NPHP4-203ENST00000378169 SLC25A16P16260 332 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 SLAQ13239 276 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 POLQO75417 2590 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 hDV102S1A0JD36 115 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 NDUFS8O00217 210 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 NCKAP5O14513 1909 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 VCANP13611 3396 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 SUMO2P61956 95 aaKnown RBP10.47□□□□□ -0.73
NPHP4-203ENST00000378169 GUSBP1Q15486 140 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 RASL11AQ6T310 242 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 STHQ8IWL8 128 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
NPHP4-203ENST00000378169 DAZ1Q9NQZ3 744 aaKnown RBP10.47□□□□□ -0.73
NPHP4-203ENST00000378169 EPG5Q9HCE0 2579 aa10.46□□□□□ -0.73
NPHP4-203ENST00000378169 DSCAMO60469 2012 aa10.46□□□□□ -0.73
NPHP4-203ENST00000378169 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.73
NPHP4-203ENST00000378169 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
NPHP4-203ENST00000378169 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
NPHP4-203ENST00000378169 FN1P02751 2386 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms