RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 BUB1B-PAK6H3BSN5 160 aa9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 Q6ZWC4 215 aa9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 PLEKHB2Q96CS7 222 aa9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 RNASE2P10153 161 aaKnown RBP9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 ZNF876PQ49A33 203 aa9.71□□□□□ -0.85
PCDHA9-201ENST00000378122 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 LYPD2Q6UXB3 125 aa9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 C14orf178Q8N769 122 aaPredicted RBP9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 SYNJ2BPP57105 145 aa9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 PRSS57Q6UWY2 283 aa9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 ZNF562Q6V9R5 426 aa9.71□□□□□ -0.86
PCDHA9-201ENST00000378122 DAD1P61803 113 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 CYYR1Q96J86 154 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 GFRA4Q9GZZ7 299 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 LMO1P25800 156 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 MORN3Q6PF18 240 aaPredicted RBP9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 KNCNA6PVL3 124 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 ZNF726P1Q15940 193 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 XCL2Q9UBD3 114 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 VWA8A3KMH1 1905 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 JPT2Q9H910 190 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 Q6ZS49 121 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
PCDHA9-201ENST00000378122 IGHV2-5P01817 119 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 IGFBPL1Q8WX77 278 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 LIME1Q9H400 295 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 SRRM4A7MD48 611 aaKnown RBP9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 C9JAW5 83 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 A0A087WWL8 130 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 IGKV1-6A0A0C4DH72 117 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 IGKV1-16P04430 117 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 DEFB113Q30KQ7 82 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 ASPHD1Q5U4P2 390 aa9.69□□□□□ -0.86
PCDHA9-201ENST00000378122 TRBV7-1A0A0A6YYK4 115 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 C9orf118A6NHY6 69 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 FOXL2NBQ6ZUU3 175 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 CFHR2P36980 270 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 ZGRF1Q86YA3 2104 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 NDUFS5O43920 106 aa9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 CNOT1A5YKK6 2376 aaKnown RBP9.68□□□□□ -0.86
PCDHA9-201ENST00000378122 ITGB1BP1O14713 200 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 CFPP27918 469 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 GAGE2AQ6NT46 116 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 A0A0J9YY99 117 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 TMEM190Q8WZ59 177 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 TSSC4Q9Y5U2 329 aaPredicted RBP9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 VCYO14598 125 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 PAX4O43316 350 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 PAX9P55771 341 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 TMEM86BQ8N661 226 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 LAMTOR3Q9UHA4 124 aa9.67□□□□□ -0.86
PCDHA9-201ENST00000378122 SAA4P35542 130 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 C5orf64Q2M2E5 130 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 C17orf82Q86X59 251 aaPredicted RBP9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 MDS2Q8NDY4 140 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 ESM1Q9NQ30 184 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 SPXQ9BT56 116 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 IGLC2P0DOY2 106 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 GHRHP01286 108 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
PCDHA9-201ENST00000378122 SMIM27A0A1W2PRY6 76 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 FNDC10F2Z333 226 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 FNDC1Q4ZHG4 1894 aaPredicted RBP9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 SLAQ13239 276 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 RASL10AQ92737 203 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 C1orf159Q96HA4 380 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 RNF5Q99942 180 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 KLF12Q9Y4X4 402 aa9.65□□□□□ -0.86
PCDHA9-201ENST00000378122 E7EQL1 145 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 C9orf139Q6ZV77 190 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 V9GYV3 84 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 K7EP34 96 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 LEPROTO15243 131 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 Q6ZS92 163 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.87
PCDHA9-201ENST00000378122 APOC4P55056 127 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 GAGE1Q13065 139 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 MINOS1Q5TGZ0 78 aa9.64□□□□□ -0.87
PCDHA9-201ENST00000378122 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms