RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TMEM70Q9BUB7 260 aa10.93□□□□□ -0.66
HMGCL-203ENST00000374490 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
HMGCL-203ENST00000374490 SH2D7A6NKC9 451 aaPredicted RBP10.92□□□□□ -0.66
HMGCL-203ENST00000374490 NCBP2LA6PVI3 153 aaKnown RBP10.92□□□□□ -0.66
HMGCL-203ENST00000374490 COX8CQ7Z4L0 72 aa10.92□□□□□ -0.66
HMGCL-203ENST00000374490 MALRD1Q5VYJ5 2156 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 TOX4O94842 621 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 FAM106CPP0CH98 169 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 HNRNPA3P51991 378 aaKnown RBP10.91□□□□□ -0.66
HMGCL-203ENST00000374490 KLK9Q2XQG4 91 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 SAPCD1Q5SSQ6 148 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 EBLN2Q6P2I7 272 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 SIRPDQ9H106 197 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 KLK9Q9UKQ9 250 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 A0A1W2PRD5 423 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 A0A1W2PRF3 423 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 F8W735 103 aaPredicted RBP10.91□□□□□ -0.66
HMGCL-203ENST00000374490 CRXO43186 299 aaPredicted RBP10.91□□□□□ -0.66
HMGCL-203ENST00000374490 LINC00614P0C842 121 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 RAB9AP51151 201 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 EFNA4P52798 201 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 RPS20P60866 119 aaKnown RBP10.91□□□□□ -0.66
HMGCL-203ENST00000374490 KLF17Q5JT82 389 aaPredicted RBP10.91□□□□□ -0.66
HMGCL-203ENST00000374490 COL5A1-AS1Q5SY13 56 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
HMGCL-203ENST00000374490 AKAP9Q99996 3911 aa10.9□□□□□ -0.66
HMGCL-203ENST00000374490 NDUFB8O95169 186 aa10.9□□□□□ -0.66
HMGCL-203ENST00000374490 CD24P25063 80 aa10.9□□□□□ -0.66
HMGCL-203ENST00000374490 NDPQ00604 133 aa10.9□□□□□ -0.66
HMGCL-203ENST00000374490 Q6ZN92 141 aa10.9□□□□□ -0.66
HMGCL-203ENST00000374490 FAM110DQ8TAY7 271 aaPredicted RBP10.9□□□□□ -0.66
HMGCL-203ENST00000374490 IGHV7-81A0A0B4J1V7 117 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 IGHV1-24A0A0C4DH33 117 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 LEPROTL1O95214 131 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 UBE2E1P51965 193 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 FAM120AOSQ5T036 256 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 HSPB8Q9UJY1 196 aa10.89□□□□□ -0.67
HMGCL-203ENST00000374490 MRPS16Q9Y3D3 137 aaKnown RBP10.89□□□□□ -0.67
HMGCL-203ENST00000374490 HIVEP1P15822 2718 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 OVOL3O00110 214 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 LCN12Q6JVE5 192 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 PET117Q6UWS5 81 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 DYNAPQ8N1N2 210 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 Q8N9W7 124 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 TMEM191AQ9H0A3 160 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 LPAR2Q9HBW0 351 aa10.88□□□□□ -0.67
HMGCL-203ENST00000374490 TMEM189A5PLL7 270 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 EGR2P11161 476 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-203ENST00000374490 ZFP36P26651 326 aaKnown RBP10.87□□□□□ -0.67
HMGCL-203ENST00000374490 BMI1P35226 326 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 SRSF2Q01130 221 aaKnown RBP10.87□□□□□ -0.67
HMGCL-203ENST00000374490 GAGE1Q13065 139 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 FOXC2Q99958 501 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 ST20Q9HBF5 79 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 S4R3C0 116 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 SYS1-DBNDD2H3BUS1 97 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 M0R3E3 92 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 NDUFS7O75251 213 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 CCL19Q99731 98 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
HMGCL-203ENST00000374490 CELSR1Q9NYQ6 3014 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 A0A087X0K7 114 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 SH2D1AO60880 128 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 CTSGP08311 255 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 ZNF25P17030 456 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-203ENST00000374490 CRIP1P50238 77 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 NRGNQ92686 78 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 LAMTOR2Q9Y2Q5 125 aa10.86□□□□□ -0.67
HMGCL-203ENST00000374490 OR4C46A6NHA9 309 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 HSBP1L1C9JCN9 74 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 BATFQ16520 125 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 FA2HQ7L5A8 372 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 DCHS2Q6V1P9 2916 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 PLXNB1O43157 2135 aa10.85□□□□□ -0.67
HMGCL-203ENST00000374490 TSPOP30536 169 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 RELQ04864 619 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-203ENST00000374490 PRR25Q96S07 402 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 ZFHX3Q15911 3703 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 M0QZ24 198 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 DLEU1O43261 78 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 IGLL1P15814 213 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
HMGCL-203ENST00000374490 ATP6V0BQ99437 205 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
HMGCL-203ENST00000374490 AP5S1Q9NUS5 200 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms