RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SPXQ9BT56 116 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 BVES-AS1Q5T3Y7 98 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 Q8TAT8 98 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 WFDC12Q8WWY7 111 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 CABIN1Q9Y6J0 2220 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 RBM3P98179 157 aaKnown RBP11.47□□□□□ -0.57
LMX1B-202ENST00000373474 SS18Q15532 418 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 CEND1Q8N111 149 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 Q8N8P6 123 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 BRWD1Q9NSI6 2320 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
LMX1B-202ENST00000373474 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
LMX1B-202ENST00000373474 ARHGEF17Q96PE2 2063 aaPredicted RBP11.46□□□□□ -0.57
LMX1B-202ENST00000373474 FAM223BA6NKX1 122 aa11.46□□□□□ -0.57
LMX1B-202ENST00000373474 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.57
LMX1B-202ENST00000373474 IGHV2-5P01817 119 aa11.46□□□□□ -0.57
LMX1B-202ENST00000373474 C3orf36Q3SXR2 165 aa11.46□□□□□ -0.57
LMX1B-202ENST00000373474 SUMO4Q6EEV6 95 aa11.46□□□□□ -0.57
LMX1B-202ENST00000373474 IGLV3-1P01715 115 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 FGF6P10767 208 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 TMEM219Q86XT9 240 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 LINC00479Q96M42 142 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 PRO1854Q9UHT4 67 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.58
LMX1B-202ENST00000373474 C14orf178Q8N769 122 aaPredicted RBP11.46□□□□□ -0.58
LMX1B-202ENST00000373474 A0A1W2PPI3 338 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 PDE6HQ13956 83 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 Q8TCH9 128 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 NDUFA4L2Q9NRX3 87 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 C1orf43Q9BWL3 253 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 ACYP1P07311 99 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 DSCR9P59020 149 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 LY6G6EA0A0G2JKS1 128 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 SRRM4A7MD48 611 aaKnown RBP11.45□□□□□ -0.58
LMX1B-202ENST00000373474 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 WDR86Q86TI4 376 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 C1orf159Q96HA4 380 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
LMX1B-202ENST00000373474 U3KQA8 63 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 SLC25A16P16260 332 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 COL8A2P25067 703 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 HAMPP81172 84 aa11.45□□□□□ -0.58
LMX1B-202ENST00000373474 YPEL3P61236 119 aaPredicted RBP11.44□□□□□ -0.58
LMX1B-202ENST00000373474 SS18L2Q9UHA2 77 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 MDC1Q14676 2089 aaKnown RBP11.44□□□□□ -0.58
LMX1B-202ENST00000373474 WIPF3A6NGB9 483 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 NDPQ00604 133 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 Q6ZS92 163 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 Q6ZWC4 215 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 C15orf53Q8NAA6 179 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 CYYR1Q96J86 154 aa11.44□□□□□ -0.58
LMX1B-202ENST00000373474 SYNJ2BPP57105 145 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 CARD19Q96LW7 228 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 GATA4P43694 442 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 B5MCH6 92 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 RSPO1Q2MKA7 263 aaPredicted RBP11.43□□□□□ -0.58
LMX1B-202ENST00000373474 ZNF114Q8NC26 417 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 C17orf58Q2M2W7 97 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 ZNRD1Q9P1U0 126 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 ANAPC1Q9H1A4 1944 aa11.43□□□□□ -0.58
LMX1B-202ENST00000373474 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 SMIM27A0A1W2PRY6 76 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 IGLL1P15814 213 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 DSCR8Q96T75 97 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 ALPK2Q86TB3 2170 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 ZNF503-AS2A6NEH8 195 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 TRAV13-1A0A0B4J241 112 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 ARMS2P0C7Q2 107 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 Q6ZR03 302 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 V9GYV3 84 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
LMX1B-202ENST00000373474 IGHV3-73A0A0B4J1V6 119 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 TRAV13-2A0A0B4J235 113 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 E7EQL1 145 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
LMX1B-202ENST00000373474 C8orf49Q96NF6 230 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 MPDZO75970 2070 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 KNTC1P50748 2209 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 IL15RAQ13261 267 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 HAPLN4Q86UW8 402 aa11.41□□□□□ -0.58
LMX1B-202ENST00000373474 C15orf65H3BRN8 121 aa11.4□□□□□ -0.58
LMX1B-202ENST00000373474 J3KT08 172 aa11.4□□□□□ -0.58
LMX1B-202ENST00000373474 FAM231DQ6ZW35 169 aa11.4□□□□□ -0.58
LMX1B-202ENST00000373474 VOPP1Q96AW1 172 aa11.4□□□□□ -0.58
LMX1B-202ENST00000373474 LY6DQ14210 128 aa11.4□□□□□ -0.59
LMX1B-202ENST00000373474 LYPD6BQ8NI32 183 aa11.4□□□□□ -0.59
LMX1B-202ENST00000373474 PLXND1Q9Y4D7 1925 aa11.4□□□□□ -0.59
LMX1B-202ENST00000373474 HLA-DRB4P13762 266 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms