RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 IGLV3-1P01715 115 aa11.77□□□□□ -0.52
NDC1-201ENST00000371429 C1orf194Q5T5A4 169 aa11.77□□□□□ -0.52
NDC1-201ENST00000371429 PARD6GQ9BYG4 376 aaPredicted RBP11.77□□□□□ -0.52
NDC1-201ENST00000371429 LAGE3Q14657 143 aa11.77□□□□□ -0.53
NDC1-201ENST00000371429 IFI27L1Q96BM0 104 aa11.77□□□□□ -0.53
NDC1-201ENST00000371429 CHTOPQ9Y3Y2 248 aaKnown RBP11.77□□□□□ -0.53
NDC1-201ENST00000371429 VCYO14598 125 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 HOXB4P17483 251 aaPredicted RBP11.76□□□□□ -0.53
NDC1-201ENST00000371429 CKS1BP61024 79 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 A0A087WWL8 130 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 DAD1P61803 113 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 NIT1Q86X76 327 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 K7ERU9 68 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 SPOCK3Q9BQ16 436 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 F5H768 121 aa11.76□□□□□ -0.53
NDC1-201ENST00000371429 MRPL27Q9P0M9 148 aaKnown RBP11.76□□□□□ -0.53
NDC1-201ENST00000371429 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 DAZAP2Q15038 168 aaPredicted RBP11.75□□□□□ -0.53
NDC1-201ENST00000371429 Q86TA4 180 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 C11orf53Q8IXP5 236 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 TDGF1P3P51864 188 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 FOXL1Q12952 345 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 ANAPC10Q9UM13 185 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 LY96Q9Y6Y9 160 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 APOC4P55056 127 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
NDC1-201ENST00000371429 PRR31Q5SQ13 230 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 LIME1Q9H400 295 aa11.75□□□□□ -0.53
NDC1-201ENST00000371429 PLP1P60201 277 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 C10orf105Q8TEF2 133 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 CHCHD1Q96BP2 118 aaKnown RBP11.74□□□□□ -0.53
NDC1-201ENST00000371429 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 IGF2RP11717 2491 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 CD300EQ496F6 205 aaPredicted RBP11.74□□□□□ -0.53
NDC1-201ENST00000371429 LSM4Q9Y4Z0 139 aaKnown RBP11.74□□□□□ -0.53
NDC1-201ENST00000371429 A0A1B0GW64 132 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 KNCNA6PVL3 124 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 SLC25A20O43772 301 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 CTAG1AP78358 180 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
NDC1-201ENST00000371429 IGHV3-64A0A075B6Q5 118 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 LINC00158P58513 81 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 C8orf86Q6ZUL3 223 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 SEM1Q6ZVN7 128 aa11.74□□□□□ -0.53
NDC1-201ENST00000371429 LYL1P12980 280 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
NDC1-201ENST00000371429 PLNP26678 52 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 NUP35Q8NFH5 326 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 SPRNQ5BIV9 151 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 TEX43Q6ZNM6 134 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 CSTL1Q9H114 145 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
NDC1-201ENST00000371429 KIF26AQ9ULI4 1882 aaPredicted RBP11.73□□□□□ -0.53
NDC1-201ENST00000371429 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
NDC1-201ENST00000371429 IGHV4-38-2P0DP08 117 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 CFHR3Q02985 330 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 Q8NA96 180 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 NAV2Q8IVL1 2488 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 SEC11AP67812 179 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 FAM90A2PQ658T7 463 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 MORN3Q6PF18 240 aaPredicted RBP11.72□□□□□ -0.53
NDC1-201ENST00000371429 KLK9Q9UKQ9 250 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 H3BUA1 57 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 RHODO00212 210 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 IGKCP01834 107 aa11.72□□□□□ -0.53
NDC1-201ENST00000371429 GHRHP01286 108 aa11.71□□□□□ -0.53
NDC1-201ENST00000371429 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
NDC1-201ENST00000371429 DENND4CQ5VZ89 1909 aa11.71□□□□□ -0.53
NDC1-201ENST00000371429 ZNF815PA8K554 130 aa11.71□□□□□ -0.54
NDC1-201ENST00000371429 LHBP01229 141 aa11.71□□□□□ -0.54
NDC1-201ENST00000371429 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.54
NDC1-201ENST00000371429 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.54
NDC1-201ENST00000371429 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.54
NDC1-201ENST00000371429 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 CDKN1BP46527 198 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms