RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 Q8N8P6 123 aa10.15□□□□□ -0.78
TPR-201ENST00000367478 TSSC4Q9Y5U2 329 aaPredicted RBP10.15□□□□□ -0.78
TPR-201ENST00000367478 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
TPR-201ENST00000367478 CHKB-CPT1BH3BT56 60 aa10.15□□□□□ -0.79
TPR-201ENST00000367478 K7EP34 96 aa10.15□□□□□ -0.79
TPR-201ENST00000367478 EFNA4P52798 201 aa10.15□□□□□ -0.79
TPR-201ENST00000367478 TMEM200BQ69YZ2 307 aa10.15□□□□□ -0.79
TPR-201ENST00000367478 ZNF329Q86UD4 541 aa10.15□□□□□ -0.79
TPR-201ENST00000367478 TIAF1O95411 115 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 RPL35AP18077 110 aaKnown RBP10.14□□□□□ -0.79
TPR-201ENST00000367478 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 IGLV3-12A0A075B6K2 115 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 COX8AP10176 69 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 GATA3P23771 443 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.14□□□□□ -0.79
TPR-201ENST00000367478 CEND1Q8N111 149 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 H0YJW9 148 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 Q6ZS49 121 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 Q86TA4 180 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 IGKV1-9A0A0C4DH69 117 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 KLHDC3Q9BQ90 382 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 A0A0G2JMZ2 1700 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 LRRC37A2A6NM11 1700 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 LRRC37AA6NMS7 1700 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 NDUFS5O43920 106 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 CELA3AP09093 270 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 CD24P25063 80 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 BUB1B-PAK6H3BSN5 160 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 SIGLEC9Q9Y336 463 aa10.14□□□□□ -0.79
TPR-201ENST00000367478 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 LGALS9BQ3B8N2 356 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 LGALS9CQ6DKI2 356 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 IGHV1-46P01743 117 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 TMEM178BH3BS89 294 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 IGHV1-18A0A0C4DH31 117 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 SHISA9B4DS77 424 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 PFN1P07737 140 aaKnown RBP10.13□□□□□ -0.79
TPR-201ENST00000367478 VSIRQ9H7M9 311 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 LYL1P12980 280 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 APOC4P55056 127 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 ATP1A1-AS1Q5TC04 95 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 LYZL4Q96KX0 146 aa10.13□□□□□ -0.79
TPR-201ENST00000367478 CDKN1AP38936 164 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 NRXN2Q9P2S2 1712 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 A0A087WWL8 130 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 SPG11Q96JI7 2443 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 F8VRH5 84 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 SMIM20Q8N5G0 67 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 HGFACQ04756 655 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 FAM104BQ5XKR9 115 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 IGHV3-53P01767 116 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 MP68P56378 58 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 A0A0A6YYD4 124 aa10.12□□□□□ -0.79
TPR-201ENST00000367478 PAQR4Q8N4S7 273 aaPredicted RBP10.12□□□□□ -0.79
TPR-201ENST00000367478 DAD1P61803 113 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 C5orf47Q569G3 176 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 Q8TAT8 98 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 RHPN1-AS1Q9BWJ2 59 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 F6UB75 175 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 IGLV3-19P01714 112 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 ZNF672Q499Z4 452 aaPredicted RBP10.11□□□□□ -0.79
TPR-201ENST00000367478 KIAA1549Q9HCM3 1950 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 A0A1W2PR77 199 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 GREB1LQ9C091 1923 aaPredicted RBP10.11□□□□□ -0.79
TPR-201ENST00000367478 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 CYTL1Q9NRR1 136 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 ORMDL1Q9P0S3 153 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 IGHG2P01859 326 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 SYNJ2BPP57105 145 aa10.11□□□□□ -0.79
TPR-201ENST00000367478 SLC25A16P16260 332 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 PFN2P35080 140 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 NCOA6Q14686 2063 aaPredicted RBP10.1□□□□□ -0.79
TPR-201ENST00000367478 ATOX1O00244 68 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 FOXF2Q12947 444 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 LCNL1Q6ZST4 164 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 NDUFA12Q9UI09 145 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 ZNF837Q96EG3 531 aaPredicted RBP10.1□□□□□ -0.79
TPR-201ENST00000367478 MUC4Q99102 2169 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 CSRP3P50461 194 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 NTF4P34130 210 aa10.1□□□□□ -0.79
TPR-201ENST00000367478 C22orf46C9J442 243 aa10.09□□□□□ -0.79
TPR-201ENST00000367478 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
TPR-201ENST00000367478 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
TPR-201ENST00000367478 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
TPR-201ENST00000367478 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms