RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SMIM27A0A1W2PRY6 76 aa9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 IGKV2D-40P01614 121 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 TMEM256Q8N2U0 113 aa9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 FAM110DQ8TAY7 271 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 RNF138Q8WVD3 245 aa9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 TRAV8-2A0A0B4J237 113 aa9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 GGTLC3B5MD39 225 aa9.74□□□□□ -0.85
CDC42BPA-203ENST00000366766 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 TRBV20-1A0A075B6N2 111 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 TDGF1P13385 188 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 Q6ZSR3 168 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 U3KQA8 63 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 SNAI2O43623 268 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 IGHV2-5P01817 119 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 PAX9P55771 341 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 PROK2Q9HC23 129 aa9.73□□□□□ -0.85
CDC42BPA-203ENST00000366766 IGF2-ASQ6U949 168 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 ARL6IP6Q8N6S5 226 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 IGF2RP11717 2491 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 CEACAM8P31997 349 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 C18orf32Q8TCD1 76 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 LENEPQ9Y5L5 61 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 C15orf65H3BRN8 121 aa9.72□□□□□ -0.85
CDC42BPA-203ENST00000366766 TRGV4A0A0C4DH28 118 aa9.71□□□□□ -0.85
CDC42BPA-203ENST00000366766 RASL10AQ92737 203 aa9.71□□□□□ -0.85
CDC42BPA-203ENST00000366766 EVI2AP22794 236 aa9.71□□□□□ -0.85
CDC42BPA-203ENST00000366766 LRP4O75096 1905 aa9.71□□□□□ -0.85
CDC42BPA-203ENST00000366766 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 FAM104BQ5XKR9 115 aa9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 NCOR2Q9Y618 2525 aa9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 LINC01356Q8N9X3 169 aa9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 RNF144BQ7Z419 303 aa9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 TRPT1Q86TN4 253 aaKnown RBP9.71□□□□□ -0.86
CDC42BPA-203ENST00000366766 HIVEP3Q5T1R4 2406 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 SAA4P35542 130 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 H3BUA1 57 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 SMAD7O15105 426 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 RCHY1Q96PM5 261 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 LY6G5BQ8NDX9 201 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 RSPO3Q9BXY4 272 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 GAGE1Q13065 139 aa9.7□□□□□ -0.86
CDC42BPA-203ENST00000366766 MEGF9Q9H1U4 602 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 J3QLI3 93 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 TFF1P04155 84 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 PLA2G2CQ5R387 149 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 K7ENP7 123 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 CD24P25063 80 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 KRTAP27-1Q3LI81 207 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 V9GYV3 84 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 H3BUX3 64 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 LGALS1P09382 135 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 RSPO1Q2MKA7 263 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZFAND6Q6FIF0 208 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 COL4A4P53420 1690 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 C17orf58Q2M2W7 97 aa9.69□□□□□ -0.86
CDC42BPA-203ENST00000366766 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 E7EQL1 145 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 IGHV2-70P01814 119 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 LEPROTO15243 131 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZNF688P0C7X2 276 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 LYNX1G3V0Z9 82 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 LYNX1P0DP58 116 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 KIR3DS1Q14943 382 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 CPAMD8Q8IZJ3 1885 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 CSTL1Q9H114 145 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 CKS1BP61024 79 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZNF114Q8NC26 417 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 MRPL53Q96EL3 112 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 Q8N8P6 123 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 SSC4DQ8WTU2 575 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
CDC42BPA-203ENST00000366766 NDUFA4O00483 81 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms