RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SS18L2Q9UHA2 77 aa0.16□□□□□ -2.38
RNU4-48P-201ENST00000365559 HSPB8Q9UJY1 196 aa0.16□□□□□ -2.38
RNU4-48P-201ENST00000365559 PRNDQ9UKY0 176 aa0.16□□□□□ -2.38
RNU4-48P-201ENST00000365559 SSR3Q9UNL2 185 aa0.16□□□□□ -2.38
RNU4-48P-201ENST00000365559 RFX7Q2KHR2 1363 aa0.16□□□□□ -2.38
RNU4-48P-201ENST00000365559 CTTNBP2Q8WZ74 1663 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 A0A0D9SG42 100 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 TRBV30A0A0K0K1B3 111 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 K7EIL1 84 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 ATP5HO75947 161 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 IDO1P14902 403 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 PHBP35232 272 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 PPP1R2P41236 205 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 ZNF137PP52743 207 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 FOXA3P55318 350 aaPredicted RBP0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 MRPS15P82914 257 aaKnown RBP0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 MSMO1Q15800 293 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 C6orf52Q5T4I8 152 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 DHRS4L2Q6PKH6 230 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 GLIPR1L1Q6UWM5 242 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 Q6ZS92 163 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 Q86TA4 180 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 NEK7Q8TDX7 302 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 MALSU1Q96EH3 234 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 SMR3AQ99954 134 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 GINS3Q9BRX5 216 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 SH3BGRL3Q9H299 93 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 LYRM2Q9NU23 88 aaPredicted RBP0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 PLAC8Q9NZF1 115 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 STOML2Q9UJZ1 356 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 RNF11Q9Y3C5 154 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 ZCCHC11Q5TAX3 1644 aaKnown RBP0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 MEGF8Q7Z7M0 2845 aa0.15□□□□□ -2.39
RNU4-48P-201ENST00000365559 ESPL1Q14674 2120 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 BCL9O00512 1426 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 TRAV5A0A0B4J249 113 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 ZNF727A8MUV8 499 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 GPR31O00270 319 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 IFNA1P01562 189 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 RPL35P42766 123 aaKnown RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 SPINK7P58062 85 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 FXYD6P3P58550 94 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 RPL37AP61513 92 aaKnown RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 ARF6P62330 175 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 RPL19P84098 196 aaKnown RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 VMA21Q3ZAQ7 101 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 OCIAD2Q56VL3 154 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 C1orf140Q5VVS0 124 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 Q6ZQY7 126 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 LINC00299Q6ZSB3 139 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 FAM216BQ8N7L0 139 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 TSKUQ8WUA8 353 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 GPX7Q96SL4 187 aaPredicted RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 LIMD2Q9BT23 127 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 OR2H1Q9GZK4 316 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 BOKQ9UMX3 212 aaPredicted RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 VIRMAQ69YN4 1812 aaKnown RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 XIRP1Q702N8 1843 aaKnown RBP0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 SYNMO15061 1565 aa0.14□□□□□ -2.39
RNU4-48P-201ENST00000365559 KIAA1107Q9UPP5 1409 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 HELZP42694 1942 aaKnown RBP0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 PTPRZ1P23471 2315 aaPredicted RBP0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 CST7O76096 145 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 MT-ND6P03923 174 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 CSN2P05814 226 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 FXYD4P59646 89 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 GNG3P63215 75 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 HBBP68871 147 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 BASP1P80723 227 aaKnown RBP0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 QRFPP83859 136 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 MIR22HGQ0VDD5 57 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 DIAPH2-AS1Q14236 149 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 POU6F1Q14863 301 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 NEDD8Q15843 81 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 RTL8BQ17RB0 113 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 FKBP1CQ5VVH2 108 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 FOXI2Q6ZQN5 318 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 ZCCHC23Q6ZST2 131 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 ATOH7Q8N100 152 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 SMIM20Q8N5G0 67 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 NUP35Q8NFH5 326 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 CCL19Q99731 98 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 RTL8AQ9BWD3 113 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 CST11Q9H112 138 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 JPT1Q9UK76 154 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 TPRKBQ9Y3C4 175 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 ASB4Q9Y574 426 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 RTL9Q8NET4 1388 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 RREB1Q92766 1687 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 DLEC1Q9Y238 1755 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 PLXNA2O75051 1894 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 UBR4Q5T4S7 5183 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 TECPR2O15040 1411 aa0.13□□□□□ -2.39
RNU4-48P-201ENST00000365559 IGF2RP11717 2491 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 EIF3AQ14152 1382 aaKnown RBP0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 C5orf58C9J3I9 102 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 H3BQV1 296 aa0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 KPNA4O00629 521 aaPredicted RBP0.12□□□□□ -2.39
RNU4-48P-201ENST00000365559 MFSD11O43934 449 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms