RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 WDR83OSQ9Y284 106 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 TRPT1Q86TN4 253 aaKnown RBP10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 C4orf51C9J302 202 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 IGLC2P0DOY2 106 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 IGLC3P0DOY3 106 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 TRAV12-1A0A0B4J245 112 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 TMEM141Q96I45 108 aa10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 CHCHD2Q9Y6H1 151 aaPredicted RBP10.85□□□□□ -0.67
SRGAP3-201ENST00000360413 C22orf46C9J442 243 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 FNDC10F2Z333 226 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 SH2D1AO60880 128 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 EFNA4P52798 201 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 CEND1Q8N111 149 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 ADAMTS7Q9UKP4 1686 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 A0A0A6YYD4 124 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 IGKV1D-43A0A0B4J1Z2 117 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 IGLV3-21P80748 117 aaPredicted RBP10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 DAZ1Q9NQZ3 744 aaKnown RBP10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 TRAV13-2A0A0B4J235 113 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 LTBRP36941 435 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
SRGAP3-201ENST00000360413 MST1P26927 711 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 SIGLEC12Q96PQ1 595 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 CELA3AP09093 270 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 C1orf159Q96HA4 380 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 CGB7P0DN87 165 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 COX8AP10176 69 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 SLC25A16P16260 332 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 BVES-AS1Q5T3Y7 98 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 PSG7Q13046 419 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 CGB3P0DN86 165 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 CRYBA4P53673 196 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 FAM201AQ5SY85 155 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
SRGAP3-201ENST00000360413 K7ERJ3 54 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 CSRP1P21291 193 aaKnown RBP10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 HGFACQ04756 655 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 Q6ZWC4 215 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 CACNA1AO00555 2505 aa10.82□□□□□ -0.68
SRGAP3-201ENST00000360413 A0A1W2PR77 199 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 NRXN2Q9P2S2 1712 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 RPUSD1Q9UJJ7 312 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 IGHV2-26A0A0B4J1V2 119 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 IGHG4P01861 327 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 J3KT08 172 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 SMIM10L1P0DMW3 83 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 ANXA2RQ3ZCQ2 193 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 C14orf178Q8N769 122 aaPredicted RBP10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 SMIM10Q96HG1 83 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 DAD1P61803 113 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 LIME1Q9H400 295 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 ACACBO00763 2458 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 NDUFB8O95169 186 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 IGHV1-2P23083 117 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 SVIPQ8NHG7 77 aa10.81□□□□□ -0.68
SRGAP3-201ENST00000360413 A0A087WV48 116 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 PSPNO60542 156 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 SYNJ2BPP57105 145 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 C18orf32Q8TCD1 76 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 CARD19Q96LW7 228 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 IGKV1D-8A0A087WSZ0 117 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 GFI1Q99684 422 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 PRO1854Q9UHT4 67 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 KIF26AQ9ULI4 1882 aaPredicted RBP10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 VMO1Q7Z5L0 202 aa10.8□□□□□ -0.68
SRGAP3-201ENST00000360413 J3QRE1 110 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 PAQR4Q8N4S7 273 aaPredicted RBP10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 CHKB-CPT1BH3BT56 60 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 TIMM23O14925 209 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 IGLL1P15814 213 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 LINC01545Q5VT33 79 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 RS1O15537 224 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 OR11H6Q8NGC7 330 aa10.79□□□□□ -0.68
SRGAP3-201ENST00000360413 Q8TAT8 98 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 SH2D6Q7Z4S9 175 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 I3L3M4 83 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 HLA-DMBP28068 263 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 SEC61GP60059 68 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 EIF4EBP2Q13542 120 aaPredicted RBP10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 IGHV2-5P01817 119 aa10.78□□□□□ -0.68
SRGAP3-201ENST00000360413 CFPP27918 469 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 IGKV1-9A0A0C4DH69 117 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 C5orf64Q2M2E5 130 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 ZNF329Q86UD4 541 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms