RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 HLA-DMBP28068 263 aa8.81□□□□□ -1
SSU72-202ENST00000359060 FXYD7P58549 80 aa8.81□□□□□ -1
SSU72-202ENST00000359060 SNHG12Q9BXW3 62 aa8.81□□□□□ -1
SSU72-202ENST00000359060 MRPL27Q9P0M9 148 aaKnown RBP8.81□□□□□ -1
SSU72-202ENST00000359060 TMEM14CQ9P0S9 112 aa8.81□□□□□ -1
SSU72-202ENST00000359060 CBY3A6NI87 242 aa8.81□□□□□ -1
SSU72-202ENST00000359060 SH2D1AO60880 128 aa8.81□□□□□ -1
SSU72-202ENST00000359060 HOXB4P17483 251 aaPredicted RBP8.81□□□□□ -1
SSU72-202ENST00000359060 LINC00322Q6ZN03 302 aaPredicted RBP8.81□□□□□ -1
SSU72-202ENST00000359060 LYPD1Q8N2G4 141 aa8.81□□□□□ -1
SSU72-202ENST00000359060 C18orf15Q96N68 181 aa8.81□□□□□ -1
SSU72-202ENST00000359060 ZNF492Q9P255 531 aa8.81□□□□□ -1
SSU72-202ENST00000359060 RNF182Q8N6D2 247 aa8.81□□□□□ -1
SSU72-202ENST00000359060 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
SSU72-202ENST00000359060 LRRK2Q5S007 2527 aa8.81□□□□□ -1
SSU72-202ENST00000359060 FABP5P3A8MUU1 101 aa8.8□□□□□ -1
SSU72-202ENST00000359060 NCR2O95944 276 aa8.8□□□□□ -1
SSU72-202ENST00000359060 RPS20P60866 119 aaKnown RBP8.8□□□□□ -1
SSU72-202ENST00000359060 ERCC8Q13216 396 aa8.8□□□□□ -1
SSU72-202ENST00000359060 Q6AWC8 147 aa8.8□□□□□ -1
SSU72-202ENST00000359060 SMIM12Q96EX1 92 aa8.8□□□□□ -1
SSU72-202ENST00000359060 ZNF414Q96IQ9 312 aa8.8□□□□□ -1
SSU72-202ENST00000359060 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
SSU72-202ENST00000359060 ORMDL3Q8N138 153 aa8.8□□□□□ -1
SSU72-202ENST00000359060 DYNAPQ8N1N2 210 aa8.8□□□□□ -1
SSU72-202ENST00000359060 POLQO75417 2590 aa8.8□□□□□ -1
SSU72-202ENST00000359060 TMEM213A2RRL7 107 aa8.8□□□□□ -1
SSU72-202ENST00000359060 CRYGBP07316 175 aa8.8□□□□□ -1
SSU72-202ENST00000359060 PLP1P60201 277 aa8.8□□□□□ -1
SSU72-202ENST00000359060 SCGB2A2Q13296 93 aa8.8□□□□□ -1
SSU72-202ENST00000359060 LDLRAD2Q5SZI1 272 aa8.8□□□□□ -1
SSU72-202ENST00000359060 TRAV41A0A0B4J266 112 aa8.8□□□□□ -1
SSU72-202ENST00000359060 D6R8Y8 96 aa8.8□□□□□ -1
SSU72-202ENST00000359060 AMN1Q8IY45 258 aa8.8□□□□□ -1
SSU72-202ENST00000359060 SETD2Q9BYW2 2564 aaPredicted RBP8.79□□□□□ -1
SSU72-202ENST00000359060 PKD1L2Q7Z442 2459 aa8.79□□□□□ -1
SSU72-202ENST00000359060 TRAV9-2A0A087WT02 112 aa8.79□□□□□ -1
SSU72-202ENST00000359060 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
SSU72-202ENST00000359060 GTSF1Q8WW33 167 aa8.79□□□□□ -1
SSU72-202ENST00000359060 TP53TG3Q9ULZ0 132 aa8.79□□□□□ -1
SSU72-202ENST00000359060 IGHV7-81A0A0B4J1V7 117 aa8.79□□□□□ -1
SSU72-202ENST00000359060 H3BUX3 64 aa8.79□□□□□ -1
SSU72-202ENST00000359060 HIST1H1AQ02539 215 aaPredicted RBP8.79□□□□□ -1
SSU72-202ENST00000359060 SLC25A34Q6PIV7 304 aa8.79□□□□□ -1
SSU72-202ENST00000359060 SIGLEC15Q6ZMC9 328 aa8.79□□□□□ -1
SSU72-202ENST00000359060 GLMPQ8WWB7 406 aa8.79□□□□□ -1
SSU72-202ENST00000359060 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
SSU72-202ENST00000359060 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
SSU72-202ENST00000359060 SMKR1H3BMG3 65 aa8.79□□□□□ -1
SSU72-202ENST00000359060 CT83Q5H943 113 aa8.79□□□□□ -1
SSU72-202ENST00000359060 BCL6BQ8N143 479 aaPredicted RBP8.79□□□□□ -1
SSU72-202ENST00000359060 LY6G5BQ8NDX9 201 aa8.79□□□□□ -1
SSU72-202ENST00000359060 FANCD2OSQ96PS1 177 aa8.79□□□□□ -1
SSU72-202ENST00000359060 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
SSU72-202ENST00000359060 MGPP08493 103 aa8.78□□□□□ -1
SSU72-202ENST00000359060 PTTG1IPP53801 180 aa8.78□□□□□ -1
SSU72-202ENST00000359060 PAX8Q06710 450 aa8.78□□□□□ -1
SSU72-202ENST00000359060 PDE6HQ13956 83 aa8.78□□□□□ -1
SSU72-202ENST00000359060 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
SSU72-202ENST00000359060 NPBQ8NG41 125 aa8.78□□□□□ -1
SSU72-202ENST00000359060 VPS25Q9BRG1 176 aa8.78□□□□□ -1
SSU72-202ENST00000359060 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
SSU72-202ENST00000359060 MOB4Q9Y3A3 225 aa8.78□□□□□ -1
SSU72-202ENST00000359060 hDV102S1A0JD36 115 aa8.78□□□□□ -1
SSU72-202ENST00000359060 NMUP48645 174 aa8.78□□□□□ -1
SSU72-202ENST00000359060 VGLL1Q99990 258 aa8.78□□□□□ -1
SSU72-202ENST00000359060 KLF12Q9Y4X4 402 aa8.78□□□□□ -1
SSU72-202ENST00000359060 F5H697 171 aa8.78□□□□□ -1
SSU72-202ENST00000359060 SRD5A1P18405 259 aa8.78□□□□□ -1
SSU72-202ENST00000359060 FCER1GP30273 86 aa8.78□□□□□ -1
SSU72-202ENST00000359060 MAJINQ3KP22 176 aa8.78□□□□□ -1
SSU72-202ENST00000359060 TM4SF20Q53R12 229 aa8.78□□□□□ -1
SSU72-202ENST00000359060 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
SSU72-202ENST00000359060 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
SSU72-202ENST00000359060 WNK1Q9H4A3 2382 aa8.77□□□□□ -1
SSU72-202ENST00000359060 GDF5OSQ5U4N7 250 aa8.77□□□□□ -1
SSU72-202ENST00000359060 TTC9CQ8N5M4 171 aa8.77□□□□□ -1
SSU72-202ENST00000359060 FAM110DQ8TAY7 271 aaPredicted RBP8.77□□□□□ -1
SSU72-202ENST00000359060 CFHR4Q92496 578 aa8.77□□□□□ -1
SSU72-202ENST00000359060 CHCHD1Q96BP2 118 aaKnown RBP8.77□□□□□ -1
SSU72-202ENST00000359060 SPOCK3Q9BQ16 436 aa8.77□□□□□ -1
SSU72-202ENST00000359060 A0A1B0GW15 77 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 M0R381 172 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 SMIM17P0DL12 118 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 EVI2AP22794 236 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 NUTF2P61970 127 aaKnown RBP8.77□□□□□ -1.01
SSU72-202ENST00000359060 TEX43Q6ZNM6 134 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 LURAP1LQ8IV03 231 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 SLC50A1Q9BRV3 221 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 GOLT1BQ9Y3E0 138 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 MAP1AP78559 2803 aaPredicted RBP8.77□□□□□ -1.01
SSU72-202ENST00000359060 NDUFA3O95167 84 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 IGKV3-20P01619 116 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 CTSGP08311 255 aa8.77□□□□□ -1.01
SSU72-202ENST00000359060 LY6LH3BQJ8 138 aa8.76□□□□□ -1.01
SSU72-202ENST00000359060 TCF21O43680 179 aa8.76□□□□□ -1.01
SSU72-202ENST00000359060 HTN1P15515 57 aa8.76□□□□□ -1.01
SSU72-202ENST00000359060 ERASQ7Z444 233 aa8.76□□□□□ -1.01
SSU72-202ENST00000359060 Q8N9W7 124 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms