RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
PHTF1-201ENST00000357783 TMEM219Q86XT9 240 aa12.32□□□□□ -0.44
PHTF1-201ENST00000357783 SMAD5-AS1Q9Y6J3 95 aa12.32□□□□□ -0.44
PHTF1-201ENST00000357783 HAX1O00165 279 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 CLEC3BP05452 202 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 URB1-AS1Q96HZ7 61 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 MIEN1Q9BRT3 115 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
PHTF1-201ENST00000357783 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 FAM181BA6NEQ2 426 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
PHTF1-201ENST00000357783 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
PHTF1-201ENST00000357783 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
PHTF1-201ENST00000357783 CLEC19AQ6UXS0 136 aa12.3□□□□□ -0.44
PHTF1-201ENST00000357783 Q8TAT8 98 aa12.3□□□□□ -0.44
PHTF1-201ENST00000357783 SPG11Q96JI7 2443 aa12.3□□□□□ -0.44
PHTF1-201ENST00000357783 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 C5orf56Q8N8D9 126 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 CCDC140Q96MF4 163 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 MAP1AP78559 2803 aaPredicted RBP12.29□□□□□ -0.44
PHTF1-201ENST00000357783 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.29□□□□□ -0.44
PHTF1-201ENST00000357783 IGHV3-66A0A0C4DH42 116 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 SERTM2A0A1B0GWG4 89 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 RIGQ13278 110 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 BRD3OSQ6XYD6 125 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 ATOH7Q8N100 152 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
PHTF1-201ENST00000357783 SH2D1AO60880 128 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 CCL19Q99731 98 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 VGLL1Q99990 258 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 CLEC5AQ9NY25 188 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 PAX8Q06710 450 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 SPATA45Q537H7 98 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 FLNCQ14315 2725 aa12.28□□□□□ -0.44
PHTF1-201ENST00000357783 IGHV3OR16-13A0A075B7E8 117 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 IGHV3-74A0A0B4J1X5 117 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 IGHG4P01861 327 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 C21orf62-AS1Q17RA5 79 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.44
PHTF1-201ENST00000357783 FAM162BQ5T6X4 162 aa12.27□□□□□ -0.45
PHTF1-201ENST00000357783 PRR25Q96S07 402 aa12.27□□□□□ -0.45
PHTF1-201ENST00000357783 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
PHTF1-201ENST00000357783 TMEM189A5PLL7 270 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 GOSR1O95249 250 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 ZNF138P52744 262 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 EEF1AKMT3Q96AZ1 226 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 IGSF10Q6WRI0 2623 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 IGHV3-49A0A0A0MS15 119 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 IGHV1-69DA0A0B4J2H0 117 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 IGHV1-69P01742 117 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 S100A7P31151 101 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 CTRLP40313 264 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 MOB4Q9Y3A3 225 aa12.26□□□□□ -0.45
PHTF1-201ENST00000357783 IGHV1-24A0A0C4DH33 117 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 ZNF207O43670 478 aaKnown RBP12.25□□□□□ -0.45
PHTF1-201ENST00000357783 BUB3O43684 328 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 PCP4P48539 62 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 KLK9Q2XQG4 91 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 SAPCD1Q5SSQ6 148 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 KLK9Q9UKQ9 250 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 C2orf70A6NJV1 201 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 CSN3P07498 182 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 Q6AWC8 147 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
PHTF1-201ENST00000357783 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
PHTF1-201ENST00000357783 MUC21A0A0G2JKD1 596 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 MAJINQ3KP22 176 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
PHTF1-201ENST00000357783 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 LINC00173Q6ZV60 143 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 USP9XQ93008 2570 aaPredicted RBP12.24□□□□□ -0.45
PHTF1-201ENST00000357783 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 ERCC8Q13216 396 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 SPATA12Q7Z6I5 190 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 PIFOQ8TCI5 191 aa12.24□□□□□ -0.45
PHTF1-201ENST00000357783 TRAV41A0A0B4J266 112 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 TMEM213A2RRL7 107 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 IGHV4-38-2P0DP08 117 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 ATP5J2P56134 94 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 ATP5G2Q06055 141 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 A0A1B0GW15 77 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 BATFQ16520 125 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 CLEC2AQ6UVW9 174 aa12.23□□□□□ -0.45
PHTF1-201ENST00000357783 RAB9AP51151 201 aa12.22□□□□□ -0.45
PHTF1-201ENST00000357783 LY6EQ16553 131 aa12.22□□□□□ -0.45
PHTF1-201ENST00000357783 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms