RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 RAB1BQ9H0U4 201 aa11.37□□□□□ -0.59
GFRA1-201ENST00000355422 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
GFRA1-201ENST00000355422 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 APC2O95996 2303 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
GFRA1-201ENST00000355422 HES1Q14469 280 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 CFHR4Q92496 578 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
GFRA1-201ENST00000355422 MFAP4P55083 255 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 SEC11AP67812 179 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 IGFL4Q6B9Z1 124 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 Q8TAT8 98 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 LINC01560Q8TB33 94 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 DPF1Q92782 380 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 PRR25Q96S07 402 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
GFRA1-201ENST00000355422 NPYP01303 97 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 HBDP02042 147 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 CKS2P33552 79 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
GFRA1-201ENST00000355422 KLRD1Q13241 179 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 TWIST1Q15672 202 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 IGLV11-55A0A075B6I3 123 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 PPBPP02775 128 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 PAX8Q06710 450 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 WFDC3Q8IUB2 231 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 NPBQ8NG41 125 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 OR1N2Q8NGR9 330 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 THYN1Q9P016 225 aa11.35□□□□□ -0.59
GFRA1-201ENST00000355422 TACC2O95359 2948 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 POLEQ07864 2286 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 LY6HO94772 140 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 NDUFA3O95167 84 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 ZNF672Q499Z4 452 aaPredicted RBP11.34□□□□□ -0.59
GFRA1-201ENST00000355422 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 VGLL1Q99990 258 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 CSMD1Q96PZ7 3565 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 C5orf64Q2M2E5 130 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
GFRA1-201ENST00000355422 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 HLA-DMBP28068 263 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 C21orf62Q9NYP8 219 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.6
GFRA1-201ENST00000355422 GVINP1Q7Z2Y8 2422 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 ACACAQ13085 2346 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 IGHV3OR16-8A0A075B7F1 116 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 SMAD7O15105 426 aaKnown RBP11.33□□□□□ -0.6
GFRA1-201ENST00000355422 NDPQ00604 133 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 NAA38Q9BRA0 125 aaKnown RBP11.33□□□□□ -0.6
GFRA1-201ENST00000355422 MSRB1Q9NZV6 116 aa11.33□□□□□ -0.6
GFRA1-201ENST00000355422 PIEZO2Q9H5I5 2752 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 A1L4Q6 167 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 RPL7P18124 248 aaKnown RBP11.32□□□□□ -0.6
GFRA1-201ENST00000355422 COX8CQ7Z4L0 72 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 SMAD5-AS1Q9Y6J3 95 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 NDUFS7O75251 213 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 NMUP48645 174 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 COTL1Q14019 142 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 PCP2Q8IVA1 136 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 DKK2Q9UBU2 259 aa11.32□□□□□ -0.6
GFRA1-201ENST00000355422 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
GFRA1-201ENST00000355422 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 IGHG4P01861 327 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
GFRA1-201ENST00000355422 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 A6NDN8 102 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 H3BRM9 83 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 H3BUT2 72 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 CEACAM3P40198 252 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 ZNF318Q5VUA4 2279 aa11.31□□□□□ -0.6
GFRA1-201ENST00000355422 ORM1P02763 201 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 BMI1P35226 326 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
GFRA1-201ENST00000355422 HSD52Q0P140 79 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
GFRA1-201ENST00000355422 CTSGP08311 255 aa11.29□□□□□ -0.6
GFRA1-201ENST00000355422 UFSP1Q6NVU6 142 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms