RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
VPS13B-201ENST00000355155 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 UFC1Q9Y3C8 167 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 FAM106AQ4KMX7 169 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 SMPXQ9UHP9 88 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 DNAJC9-AS1A6NH13 148 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
VPS13B-201ENST00000355155 IGHV3-11P01762 117 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 C8orf86Q6ZUL3 223 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
VPS13B-201ENST00000355155 ABCA1O95477 2261 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 ATP5L2Q7Z4Y8 100 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 NHLRC2Q8NBF2 726 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
VPS13B-201ENST00000355155 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
VPS13B-201ENST00000355155 TRGC1P0CF51 173 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 SAV1Q9H4B6 383 aaPredicted RBP13.11□□□□□ -0.31
VPS13B-201ENST00000355155 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
VPS13B-201ENST00000355155 HOXA5P20719 270 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 C10orf99Q6UWK7 81 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 ZC2HC1AQ96GY0 325 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 MT-ND6P03923 174 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 BMI1P35226 326 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 CDX1P47902 265 aaPredicted RBP13.1□□□□□ -0.31
VPS13B-201ENST00000355155 WDR73Q6P4I2 378 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 C9orf47Q6ZRZ4 202 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 GBGT1Q8N5D6 347 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 PRR25Q96S07 402 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
VPS13B-201ENST00000355155 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 LENEPQ9Y5L5 61 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 A8MWL6 223 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 Q6ZSV7 163 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 GATD1Q8NB37 220 aa13.09□□□□□ -0.31
VPS13B-201ENST00000355155 A0A1B0GXF2 115 aa13.08□□□□□ -0.31
VPS13B-201ENST00000355155 CRIP1P50238 77 aa13.08□□□□□ -0.31
VPS13B-201ENST00000355155 IL17RELQ6ZVW7 336 aa13.08□□□□□ -0.31
VPS13B-201ENST00000355155 ESM1Q9NQ30 184 aa13.08□□□□□ -0.31
VPS13B-201ENST00000355155 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.31
VPS13B-201ENST00000355155 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.32
VPS13B-201ENST00000355155 P01737 135 aa13.08□□□□□ -0.32
VPS13B-201ENST00000355155 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
VPS13B-201ENST00000355155 TRBV7-9A0A0J9YWB2 115 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 S100A6P06703 90 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
VPS13B-201ENST00000355155 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 CSMD1Q96PZ7 3565 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
VPS13B-201ENST00000355155 TMEM136Q6ZRR5 245 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 NUP35Q8NFH5 326 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
VPS13B-201ENST00000355155 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
VPS13B-201ENST00000355155 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
VPS13B-201ENST00000355155 HLA-DMBP28068 263 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 RHPN1-AS1Q9BWJ2 59 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 POLQO75417 2590 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 KLF5Q13887 457 aaPredicted RBP13.06□□□□□ -0.32
VPS13B-201ENST00000355155 KLHDC1Q8N7A1 406 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
VPS13B-201ENST00000355155 NEU1Q99519 415 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
VPS13B-201ENST00000355155 Q6AWC8 147 aa13.05□□□□□ -0.32
VPS13B-201ENST00000355155 VGLL1Q99990 258 aa13.05□□□□□ -0.32
VPS13B-201ENST00000355155 CENPEQ02224 2701 aa13.05□□□□□ -0.32
VPS13B-201ENST00000355155 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
VPS13B-201ENST00000355155 OVOL1O14753 267 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 NDUFA7O95182 113 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 FAM19A4Q96LR4 140 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 IGHV4OR15-8A0A075B7B6 117 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 A0A087WW49 117 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 PRAC2D3DTV9 90 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 HILS1P60008 231 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 FABP9Q0Z7S8 132 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 TCTEX1D4Q5JR98 221 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 PRR27Q6MZM9 219 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
VPS13B-201ENST00000355155 APRG1Q8IVJ8 170 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
VPS13B-201ENST00000355155 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
VPS13B-201ENST00000355155 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 RBPMS2Q6ZRY4 209 aaKnown RBP13.03□□□□□ -0.32
VPS13B-201ENST00000355155 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 FAM181BA6NEQ2 426 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 FOSL1P15407 271 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
VPS13B-201ENST00000355155 C20orf173Q96LM9 149 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 ABCA12Q86UK0 2595 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 HIGD1CA8MV81 97 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms