RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 TEX29Q8N6K0 151 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 SLC25A39Q9BZJ4 359 aaPredicted RBP6.19□□□□□ -1.42
CD46-203ENST00000354848 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
CD46-203ENST00000354848 TMEM14CQ9P0S9 112 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 DSPP15924 2871 aaKnown RBP6.19□□□□□ -1.42
CD46-203ENST00000354848 ZNF318Q5VUA4 2279 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 CFAP47Q6ZTR5 3102 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 IGKV3-15P01624 115 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 LYZP61626 148 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 ZNF833PQ6ZTB9 187 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 MOGAT3Q86VF5 341 aa6.19□□□□□ -1.42
CD46-203ENST00000354848 SRSF8Q9BRL6 282 aaKnown RBP6.19□□□□□ -1.42
CD46-203ENST00000354848 RPUSD1Q9UJJ7 312 aaKnown RBP6.19□□□□□ -1.42
CD46-203ENST00000354848 IL4P05112 153 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 PSMB2P49721 201 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 TRBV19A0A075B6N1 114 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
CD46-203ENST00000354848 MZT1Q08AG7 82 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 SMIM20Q8N5G0 67 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 PRRC2CQ9Y520 2896 aaKnown RBP6.18□□□□□ -1.42
CD46-203ENST00000354848 CNIH1O95406 144 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 CECR9P0C854 216 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 SFTA2Q6UW10 78 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 SIGLEC15Q6ZMC9 328 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 SAP25Q8TEE9 199 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 RPEQ96AT9 228 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 VCX2Q9H322 139 aa6.18□□□□□ -1.42
CD46-203ENST00000354848 NCBP2LA6PVI3 153 aaKnown RBP6.17□□□□□ -1.42
CD46-203ENST00000354848 LINC01619G3V211 115 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 M0R3E3 92 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 SH2D1AO60880 128 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 CCL11P51671 97 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 DIAPH2-AS1Q14236 149 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 ANXA2RQ3ZCQ2 193 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 MBNL2Q5VZF2 373 aaKnown RBP6.17□□□□□ -1.42
CD46-203ENST00000354848 OR4C13Q8NGP0 309 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 CITED1Q99966 193 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 TMEM133Q9H2Q1 129 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 NXT2Q9NPJ8 142 aaKnown RBP6.17□□□□□ -1.42
CD46-203ENST00000354848 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 MED13Q9UHV7 2174 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 DMDP11532 3685 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 LOC107984156A0A0G2JMH3 177 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 LHBP01229 141 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 IGLV2-23P01705 113 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 APELAP0DMC3 54 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 ARL17AQ8IVW1 177 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 LINC00574Q9H8X3 128 aa6.17□□□□□ -1.42
CD46-203ENST00000354848 ICE1Q9Y2F5 2266 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 SRD5A1P18405 259 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 PVRIGQ6DKI7 326 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 KIR2DL4Q99706 377 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 NGBQ9NPG2 151 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 NDUFA3O95167 84 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 BRI3O95415 125 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 MSMPQ1L6U9 139 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 DEFB127Q9H1M4 99 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 AHCTF1Q8WYP5 2266 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 MYMXA0A1B0GTQ4 84 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 RHODO00212 210 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 GATA1P15976 413 aaPredicted RBP6.16□□□□□ -1.42
CD46-203ENST00000354848 UBE2D3P61077 147 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 UBE2D2P62837 147 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 MRGPRG-AS1Q2M3A8 158 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 CADP27708 2225 aa6.16□□□□□ -1.42
CD46-203ENST00000354848 A0A087WX48 190 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE12JA6NER3 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE7O76087 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 EGR2P11161 476 aaPredicted RBP6.15□□□□□ -1.42
CD46-203ENST00000354848 NDUFV3P56181 108 aaKnown RBP6.15□□□□□ -1.42
CD46-203ENST00000354848 GAGE4Q13068 117 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 Q6ZT83 130 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 SCNM1Q9BWG6 230 aa6.15□□□□□ -1.42
CD46-203ENST00000354848 TMEM262E9PQX1 116 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 K7EM74 188 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 IGLC6P0CF74 106 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 LYPD1Q8N2G4 141 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 FAM216BQ8N7L0 139 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 AJUBAQ96IF1 538 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 GAFA1Q96PS6 74 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 CCL13Q99616 98 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 SPRR3Q9UBC9 169 aa6.15□□□□□ -1.43
CD46-203ENST00000354848 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 FABP5P3A8MUU1 101 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TM4SF5O14894 197 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms