RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 J3KRW8 73 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 IGKV3-15P01624 115 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 PLGLAQ15195 96 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 MLST8Q9BVC4 326 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 MRPL16Q9NX20 251 aaKnown RBP12.05□□□□□ -0.48
PTBP1-201ENST00000349038 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 OSR1Q8TAX0 266 aaPredicted RBP12.05□□□□□ -0.48
PTBP1-201ENST00000349038 PRSS22Q9GZN4 317 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 RELNP78509 3460 aa12.05□□□□□ -0.48
PTBP1-201ENST00000349038 IGKV1D-37A0A075B6S9 117 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 TMEM189A5PLL7 270 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 TMEM8BA6NDV4 472 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 SPRY2O43597 315 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.482e-6■■■□□ 18.5
PTBP1-201ENST00000349038 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
PTBP1-201ENST00000349038 UFC1Q9Y3C8 167 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
PTBP1-201ENST00000349038 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 FOXI2Q6ZQN5 318 aa12.04□□□□□ -0.48
PTBP1-201ENST00000349038 HAX1O00165 279 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 PRTN3P24158 256 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 CNTFRP26992 372 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 Q6ZT83 130 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 C1orf210Q8IVY1 113 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 PSG8Q9UQ74 426 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 HIGD1AQ9Y241 93 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 IGKV2-40A0A087WW87 121 aaPredicted RBP12.03□□□□□ -0.48
PTBP1-201ENST00000349038 IGKV2D-40P01614 121 aaPredicted RBP12.03□□□□□ -0.48
PTBP1-201ENST00000349038 LGALS9BQ3B8N2 356 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 LGALS9CQ6DKI2 356 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 TMEM133Q9H2Q1 129 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
PTBP1-201ENST00000349038 A0A1W2PNU3 283 aaPredicted RBP12.02□□□□□ -0.48
PTBP1-201ENST00000349038 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 SRRM5B3KS81 715 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 IGHV3-23P01764 117 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 CGB3P0DN86 165 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 CGB7P0DN87 165 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 POU2AF1Q16633 256 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 MSMPQ1L6U9 139 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 C12orf74Q32Q52 190 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.48
PTBP1-201ENST00000349038 FER1L6-AS2Q96M78 137 aa12.02□□□□□ -0.48
PTBP1-201ENST00000349038 TMEM238LA0A1B0GVL6 79 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 A0A1W2PPI3 338 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 ARL3P36405 182 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 EMP1P54849 157 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 ZNF714Q96N38 554 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 IGKCP01834 107 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTBP1-201ENST00000349038 KLF17Q5JT82 389 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-201ENST00000349038 C8orf86Q6ZUL3 223 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 CEND1Q8N111 149 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.49
PTBP1-201ENST00000349038 TMEM158Q8WZ71 300 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 KIR2DL4Q99706 377 aa12.02□□□□□ -0.49
PTBP1-201ENST00000349038 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
PTBP1-201ENST00000349038 EFNA4P52798 201 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 SOX21Q9Y651 276 aaPredicted RBP12.01□□□□□ -0.49
PTBP1-201ENST00000349038 SCGB1C2P0DMR2 95 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 SMIM20Q8N5G0 67 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 PRSS33Q8NF86 280 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 CACNG8Q8WXS5 425 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 NDUFA4L2Q9NRX3 87 aa12.01□□□□□ -0.49
PTBP1-201ENST00000349038 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
PTBP1-201ENST00000349038 F8W1H4 67 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 CRIP1P50238 77 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 XGP55808 180 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 TCF15Q12870 199 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 SHISA2Q6UWI4 295 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
PTBP1-201ENST00000349038 MZT1Q08AG7 82 aa11.99□□□□□ -0.49
PTBP1-201ENST00000349038 RASL11BQ9BPW5 248 aa11.99□□□□□ -0.49
PTBP1-201ENST00000349038 SMPXQ9UHP9 88 aa11.99□□□□□ -0.49
PTBP1-201ENST00000349038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■■■□ 21.4
PTBP1-201ENST00000349038 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
PTBP1-201ENST00000349038 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
PTBP1-201ENST00000349038 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 C1orf162Q8NEQ5 155 aaPredicted RBP11.98□□□□□ -0.49
PTBP1-201ENST00000349038 RPEQ96AT9 228 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 VKORC1Q9BQB6 163 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 SLC25A39Q9BZJ4 359 aaPredicted RBP11.98□□□□□ -0.49
PTBP1-201ENST00000349038 ZNF492Q9P255 531 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 IGLV1-44P01699 117 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 IL4P05112 153 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 ZNF562Q6V9R5 426 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 HERV-K104P63124 156 aa11.98□□□□□ -0.49
PTBP1-201ENST00000349038 GP9P14770 177 aa11.97□□□□□ -0.49
PTBP1-201ENST00000349038 WT1P19544 449 aaPredicted RBP11.97□□□□□ -0.49
PTBP1-201ENST00000349038 HLA-DMBP28068 263 aa11.97□□□□□ -0.49
PTBP1-201ENST00000349038 ATP5IP56385 69 aaPredicted RBP11.97□□□□□ -0.49
PTBP1-201ENST00000349038 CCL17Q92583 94 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms