RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 NPIPB6E9PJ23 425 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 CHEK1O14757 476 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 C10orf99Q6UWK7 81 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 RNF152Q8N8N0 203 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 TSKUQ8WUA8 353 aa17.22■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IGHV3-49A0A0A0MS15 119 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 CA1P00915 261 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 P01737 135 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 NDUFA6P56556 154 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 DAZAP1Q96EP5 407 aaKnown RBP17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 UNC79Q9P2D8 2635 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 TRAPPC1Q9Y5R8 145 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 A0A1W2PS18 150 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 IZUMO1RA6ND01 250 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 HOXA5P20719 270 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 COX19Q49B96 90 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 COX8CQ7Z4L0 72 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 GBGT1Q8N5D6 347 aa17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 MRPL53Q96EL3 112 aaKnown RBP17.21■□□□□ 0.35
TNFRSF10B-202ENST00000347739 GCN1Q92616 2671 aaKnown RBP17.21■□□□□ 0.34
TNFRSF10B-202ENST00000347739 TCL1AP56279 114 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 LCN12Q6JVE5 192 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 GPHB5Q86YW7 130 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 OR4B1Q8NGF8 309 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 ZC2HC1AQ96GY0 325 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 CLEC5AQ9NY25 188 aa17.2■□□□□ 0.34
TNFRSF10B-202ENST00000347739 K7EMT4 169 aa17.19■□□□□ 0.34
TNFRSF10B-202ENST00000347739 HLA-DMBP28068 263 aa17.19■□□□□ 0.34
TNFRSF10B-202ENST00000347739 C8orf86Q6ZUL3 223 aa17.19■□□□□ 0.34
TNFRSF10B-202ENST00000347739 DAZ1Q9NQZ3 744 aaKnown RBP17.19■□□□□ 0.34
TNFRSF10B-202ENST00000347739 NAT8BQ9UHF3 227 aa17.19■□□□□ 0.34
TNFRSF10B-202ENST00000347739 IGKV2-40A0A087WW87 121 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 RBAKDNA6NC62 111 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 A8MWL6 223 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 IGKV2D-40P01614 121 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 RPLP1P05386 114 aaKnown RBP17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 FAM106AQ4KMX7 169 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 IGFL4Q6B9Z1 124 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 GNB1LQ9BYB4 327 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 ITPR2Q14571 2701 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 SAPCD1Q5SSQ6 148 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 WDR73Q6P4I2 378 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 Q71RC1 249 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 GFRA4Q9GZZ7 299 aa17.18■□□□□ 0.34
TNFRSF10B-202ENST00000347739 FLNAP21333 2647 aaKnown RBP17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 TRAV8-2A0A0B4J237 113 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 IGHV7-4-1A0A0J9YVY3 117 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 FAM231BA6NCW3 169 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 MT-ND6P03923 174 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 RASL11AQ6T310 242 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 DUX5Q96PT3 197 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 NEU1Q99519 415 aa17.17■□□□□ 0.34
TNFRSF10B-202ENST00000347739 ZNF705FA8MVS1 300 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 LGALS1P09382 135 aaKnown RBP17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 CBLN1P23435 193 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 CDX1P47902 265 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 NUP35Q8NFH5 326 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 UBE2E2Q96LR5 201 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 AKAP9Q99996 3911 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 AKR1D1P51857 326 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 SMUG1Q53HV7 270 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 RNF182Q8N6D2 247 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 WIPF2Q8TF74 440 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 PRR25Q96S07 402 aa17.16■□□□□ 0.34
TNFRSF10B-202ENST00000347739 HIGD1CA8MV81 97 aa17.15■□□□□ 0.34
TNFRSF10B-202ENST00000347739 CT45A10P0DMU9 189 aa17.15■□□□□ 0.34
TNFRSF10B-202ENST00000347739 COA6Q5JTJ3 125 aaKnown RBP17.15■□□□□ 0.34
TNFRSF10B-202ENST00000347739 VGLL1Q99990 258 aa17.15■□□□□ 0.34
TNFRSF10B-202ENST00000347739 CCDC168Q8NDH2 2452 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 DNAJC9-AS1A6NH13 148 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 SNURFLB1AK76 121 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 FRMD6-AS1P0C7T7 363 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 PRB4P10163 310 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 ATP5L2Q7Z4Y8 100 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 C8orf49Q96NF6 230 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 MRPL18Q9H0U6 180 aaKnown RBP17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 YAE1D1Q9NRH1 226 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 UFC1Q9Y3C8 167 aa17.14■□□□□ 0.33
TNFRSF10B-202ENST00000347739 SPINK4O60575 86 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 CRIP1P50238 77 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 TM4SF20Q53R12 229 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 TMEM136Q6ZRR5 245 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 RHPN1-AS1Q9BWJ2 59 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 SMPXQ9UHP9 88 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 MRPL54Q6P161 138 aaKnown RBP17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 ASCL2Q99929 193 aa17.13■□□□□ 0.33
TNFRSF10B-202ENST00000347739 PRAC2D3DTV9 90 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 SOCS3O14543 225 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 HLA-DQA1P01909 254 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 S100A8P05109 93 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 OR2D3Q8NGH3 330 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 GTSF1Q8WW33 167 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 C16orf92Q96LL3 132 aa17.12■□□□□ 0.33
TNFRSF10B-202ENST00000347739 HIST3H2BBQ8N257 126 aa17.11■□□□□ 0.33
TNFRSF10B-202ENST00000347739 NDFIP1Q9BT67 221 aa17.11■□□□□ 0.33
TNFRSF10B-202ENST00000347739 TMEM160Q9NX00 188 aa17.11■□□□□ 0.33
TNFRSF10B-202ENST00000347739 XKRY2A2RUG3 117 aa17.1■□□□□ 0.33
TNFRSF10B-202ENST00000347739 FOXA3P55318 350 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF10B-202ENST00000347739 SCGB2A2Q13296 93 aa17.1■□□□□ 0.33
TNFRSF10B-202ENST00000347739 TCF24Q7RTU0 167 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms