RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MZT1Q08AG7 82 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 PCOLCEQ15113 449 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 TTC32Q5I0X7 151 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 MORN5Q5VZ52 161 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 FAM90A1Q86YD7 464 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 TMEM75Q8N9X5 138 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 SLC25A39Q9BZJ4 359 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-201ENST00000343524 Q9H3A6 140 aa6.49□□□□□ -1.37
ATG4A-201ENST00000343524 NXT2Q9NPJ8 142 aaKnown RBP6.49□□□□□ -1.37
ATG4A-201ENST00000343524 A8MWV9 139 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 PROP1O75360 226 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 FCER1GP30273 86 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 LINC00205P59089 165 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 RPL39P5Q59GN2 51 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 YRDCQ86U90 279 aaKnown RBP6.48□□□□□ -1.37
ATG4A-201ENST00000343524 SRSF12Q8WXF0 261 aaKnown RBP6.48□□□□□ -1.37
ATG4A-201ENST00000343524 CXXC4Q9H2H0 198 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 FSCN3Q9NQT6 498 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 DKK2Q9UBU2 259 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 ATMQ13315 3056 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 LOC389332A0A1B0GUA5 103 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 WI2-2373I1.2A0A1W2PRP0 233 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 CFIP05156 583 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 GRPP07492 148 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 PLNP26678 52 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 PRR30Q53SZ7 412 aaPredicted RBP6.48□□□□□ -1.37
ATG4A-201ENST00000343524 ZC2HC1BQ5TFG8 222 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 IGF2-ASQ6U949 168 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 RFESDQ8TAC1 157 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 RPEQ96AT9 228 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
ATG4A-201ENST00000343524 RELNP78509 3460 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 FLNCQ14315 2725 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 IGHV1-45A0A0A0MS14 117 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 FSTL3O95633 263 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 RBP4P02753 201 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 PRSS1P07477 247 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 GP9P14770 177 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 CD27P26842 260 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 LOXL1Q08397 574 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-201ENST00000343524 FAM53AQ6NSI3 398 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-201ENST00000343524 PATE2Q6UY27 113 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 SBSPONQ8IVN8 264 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 SPANXCQ9NY87 97 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
ATG4A-201ENST00000343524 KRTAP9-6A0A140TA67 174 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 ADARB2-AS1A8MUL3 147 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 PRRG2O14669 202 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 CKS2P33552 79 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 CFHR2P36980 270 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 CCL11P51671 97 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 PRR31Q5SQ13 230 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 NFE4Q86UQ8 179 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 ZCCHC24Q8N2G6 241 aaKnown RBP6.46□□□□□ -1.37
ATG4A-201ENST00000343524 OR10J6PQ8NGY7 276 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 GLMPQ8WWB7 406 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 RAB1BQ9H0U4 201 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 FBXL15Q9H469 300 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.37
ATG4A-201ENST00000343524 HCFC1P51610 2035 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 TET2Q6N021 2002 aaPredicted RBP6.46□□□□□ -1.37
ATG4A-201ENST00000343524 AHCTF1Q8WYP5 2266 aa6.46□□□□□ -1.37
ATG4A-201ENST00000343524 PI4KAP42356 2102 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 PCSK5Q92824 1860 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 LRRK2Q5S007 2527 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 A0A1W2PR77 199 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 ZNF503-AS2A6NEH8 195 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 OVOL3O00110 214 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 SAA2P0DJI9 122 aaPredicted RBP6.46□□□□□ -1.38
ATG4A-201ENST00000343524 FHL3Q13643 280 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 PLGLAQ15195 96 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 MRPL23Q16540 153 aaKnown RBP6.46□□□□□ -1.38
ATG4A-201ENST00000343524 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
ATG4A-201ENST00000343524 PRNTQ86SH4 94 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 PPP1R27Q86WC6 154 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 OR11H6Q8NGC7 330 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 TRGV9Q99603 122 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 OBP2BQ9NPH6 170 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 TPSG1Q9NRR2 321 aa6.46□□□□□ -1.38
ATG4A-201ENST00000343524 NBPF19A0A087WUL8 3843 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 A0A087WX48 190 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
ATG4A-201ENST00000343524 FAM106CPP0CH98 169 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 TNFRSF1AP19438 455 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 UCNP55089 124 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 LOXL3P58215 753 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 UBE2D3P61077 147 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 UBE2D2P62837 147 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 EDDM3AQ14507 147 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 GTSCR1Q86UQ5 136 aa6.45□□□□□ -1.38
ATG4A-201ENST00000343524 LYPD1Q8N2G4 141 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms