RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PEF1Q9UBV8 284 aaKnown RBP15.32■□□□□ 0.04
RTN1-202ENST00000342503 IGKV2-40A0A087WW87 121 aaPredicted RBP15.31■□□□□ 0.04
RTN1-202ENST00000342503 IGKV2D-40P01614 121 aaPredicted RBP15.31■□□□□ 0.04
RTN1-202ENST00000342503 FRMD6-AS1P0C7T7 363 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 RPP21Q9H633 154 aaKnown RBP15.31■□□□□ 0.04
RTN1-202ENST00000342503 IZUMO1RA6ND01 250 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 ZNF705FA8MVS1 300 aaPredicted RBP15.31■□□□□ 0.04
RTN1-202ENST00000342503 HOXA5P20719 270 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 SLC35B1P78383 322 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 GBGT1Q8N5D6 347 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 GLMPQ8WWB7 406 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 DAZAP1Q96EP5 407 aaKnown RBP15.31■□□□□ 0.04
RTN1-202ENST00000342503 ZC2HC1AQ96GY0 325 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 SLC50A1Q9BRV3 221 aa15.31■□□□□ 0.04
RTN1-202ENST00000342503 P01737 135 aa15.3■□□□□ 0.04
RTN1-202ENST00000342503 CBLN1P23435 193 aa15.3■□□□□ 0.04
RTN1-202ENST00000342503 KRTAP1-1Q07627 177 aa15.3■□□□□ 0.04
RTN1-202ENST00000342503 LCN12Q6JVE5 192 aa15.3■□□□□ 0.04
RTN1-202ENST00000342503 TSKUQ8WUA8 353 aa15.3■□□□□ 0.04
RTN1-202ENST00000342503 RPLP1P05386 114 aaKnown RBP15.29■□□□□ 0.04
RTN1-202ENST00000342503 RNF182Q8N6D2 247 aa15.29■□□□□ 0.04
RTN1-202ENST00000342503 MXRA5Q9NR99 2828 aa15.29■□□□□ 0.04
RTN1-202ENST00000342503 TRAV8-2A0A0B4J237 113 aa15.29■□□□□ 0.04
RTN1-202ENST00000342503 RPL19P84098 196 aaKnown RBP15.29■□□□□ 0.04
RTN1-202ENST00000342503 C8orf49Q96NF6 230 aa15.29■□□□□ 0.04
RTN1-202ENST00000342503 CD5LO43866 347 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 MEOX2P50222 304 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 FOXE3Q13461 319 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 CT83Q5H943 113 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 MRPL54Q6P161 138 aaKnown RBP15.28■□□□□ 0.04
RTN1-202ENST00000342503 C8orf86Q6ZUL3 223 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 NUP35Q8NFH5 326 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 NEU1Q99519 415 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 VGLL1Q99990 258 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 NAT8BQ9UHF3 227 aa15.28■□□□□ 0.04
RTN1-202ENST00000342503 NPIPB6E9PJ23 425 aa15.27■□□□□ 0.04
RTN1-202ENST00000342503 ELANEP08246 267 aa15.27■□□□□ 0.04
RTN1-202ENST00000342503 Q8N2B8 174 aa15.27■□□□□ 0.04
RTN1-202ENST00000342503 TMEM86BQ8N661 226 aa15.27■□□□□ 0.04
RTN1-202ENST00000342503 MRPL18Q9H0U6 180 aaKnown RBP15.27■□□□□ 0.04
RTN1-202ENST00000342503 SNURFLB1AK76 121 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 PRAC2D3DTV9 90 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 CDX1P47902 265 aaPredicted RBP15.26■□□□□ 0.03
RTN1-202ENST00000342503 GFI1BQ5VTD9 330 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 GNB1LQ9BYB4 327 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 YAE1D1Q9NRH1 226 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 AKAP9Q99996 3911 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 IGHV7-4-1A0A0J9YVY3 117 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 FBLL1A6NHQ2 334 aaKnown RBP15.26■□□□□ 0.03
RTN1-202ENST00000342503 A8MWL6 223 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 CRIP1P50238 77 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 TM4SF20Q53R12 229 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 WDR73Q6P4I2 378 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 TCF24Q7RTU0 167 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 OR4B1Q8NGF8 309 aa15.26■□□□□ 0.03
RTN1-202ENST00000342503 A0A1W2PS18 150 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 XKRY2A2RUG3 117 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 HIGD1CA8MV81 97 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 FAM106AQ4KMX7 169 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 TMEM136Q6ZRR5 245 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 GPHB5Q86YW7 130 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 MYOZ3Q8TDC0 251 aa15.25■□□□□ 0.03
RTN1-202ENST00000342503 IFITM10A6NMD0 228 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 ERCC8Q13216 396 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 COX19Q49B96 90 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 SAPCD1Q5SSQ6 148 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 HIST3H2BBQ8N257 126 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 Q8TAT8 98 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 PRR25Q96S07 402 aa15.24■□□□□ 0.03
RTN1-202ENST00000342503 OR2D3Q8NGH3 330 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 GTSF1Q8WW33 167 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 MRPL53Q96EL3 112 aaKnown RBP15.23■□□□□ 0.03
RTN1-202ENST00000342503 C16orf92Q96LL3 132 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 DAZ1Q9NQZ3 744 aaKnown RBP15.23■□□□□ 0.03
RTN1-202ENST00000342503 GCN1Q92616 2671 aaKnown RBP15.23■□□□□ 0.03
RTN1-202ENST00000342503 RBAKDNA6NC62 111 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 K7EMT4 169 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 LGALS1P09382 135 aaKnown RBP15.23■□□□□ 0.03
RTN1-202ENST00000342503 CT45A10P0DMU9 189 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 PDZD11Q5EBL8 140 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 COX8CQ7Z4L0 72 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 LINC00518Q8N0U6 118 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 RNF152Q8N8N0 203 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 RHPN1-AS1Q9BWJ2 59 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 GFRA4Q9GZZ7 299 aa15.23■□□□□ 0.03
RTN1-202ENST00000342503 FLNAP21333 2647 aaKnown RBP15.22■□□□□ 0.03
RTN1-202ENST00000342503 DNAJC9-AS1A6NH13 148 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 GZMBP10144 247 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 EDN2P20800 178 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 RAB4BP61018 213 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 WIPF2Q8TF74 440 aaPredicted RBP15.22■□□□□ 0.03
RTN1-202ENST00000342503 GPR61Q9BZJ8 451 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 SMPXQ9UHP9 88 aa15.22■□□□□ 0.03
RTN1-202ENST00000342503 CCDC168Q8NDH2 2452 aa15.21■□□□□ 0.03
RTN1-202ENST00000342503 MT-ND6P03923 174 aa15.21■□□□□ 0.03
RTN1-202ENST00000342503 COA6Q5JTJ3 125 aaKnown RBP15.21■□□□□ 0.03
RTN1-202ENST00000342503 PGLYRP4Q96LB8 373 aa15.21■□□□□ 0.03
RTN1-202ENST00000342503 UBE2E2Q96LR5 201 aa15.21■□□□□ 0.03
RTN1-202ENST00000342503 RASL11AQ6T310 242 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 C20orf173Q96LM9 149 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms