RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 BMI1P35226 326 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RNF114Q9Y508 228 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ABCA1O95477 2261 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 M0R3E3 92 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CHEK1O14757 476 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 U3KQK5 164 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 C2orf70A6NJV1 201 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 DSCR9P59020 149 aa8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SSBP4Q9BWG4 385 aaPredicted RBP8.3□□□□□ -1.08
TRAF3IP2-201ENST00000340026 GATA3P23771 443 aa8.29□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CCL19Q99731 98 aa8.29□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CLEC3BP05452 202 aa8.29□□□□□ -1.08
TRAF3IP2-201ENST00000340026 GPR183P32249 361 aa8.29□□□□□ -1.08
TRAF3IP2-201ENST00000340026 NPFFR1Q9GZQ6 430 aa8.29□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGLC6P0CF74 106 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 KRTDAPP60985 99 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 S4R3C0 116 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SPTBN1Q01082 2364 aaKnown RBP8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 TRAV41A0A0B4J266 112 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 M0R143 59 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 M0R2Z0 102 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SH2D1AO60880 128 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGHG2P01859 326 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 LINC00614P0C842 121 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGHV4-61A0A0C4DH41 118 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 TMEM189A5PLL7 270 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CD33P20138 364 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 LCN12Q6JVE5 192 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CLEC2AQ6UVW9 174 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 KLHDC1Q8N7A1 406 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 USMG5Q96IX5 58 aa8.27□□□□□ -1.08
TRAF3IP2-201ENST00000340026 COL6A6A6NMZ7 2263 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 A6NDX4 124 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 SSTP61278 116 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 METTL26Q96S19 204 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LENEPQ9Y5L5 61 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 ABCA2Q9BZC7 2435 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 PPIFP30405 207 aaKnown RBP8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TDRG1Q3Y452 100 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 EBLN2Q6P2I7 272 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 FAM19A2Q8N3H0 131 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LINC00469Q8N7U9 141 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 C8orf49Q96NF6 230 aa8.27□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TACC2O95359 2948 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 IGHV1-24A0A0C4DH33 117 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 IGHV3-23P01764 117 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 G3V318 75 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 RNASEKQ6P5S7 137 aaKnown RBP8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 ASCL2Q99929 193 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TMEM70Q9BUB7 260 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 SNHG12Q9BXW3 62 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 UQCR10Q9UDW1 63 aa8.26□□□□□ -1.09
TRAF3IP2-201ENST00000340026 IGKV2-40A0A087WW87 121 aaPredicted RBP8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 FABP5P3A8MUU1 101 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 NDUFA4O00483 81 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 IGKV2D-40P01614 121 aaPredicted RBP8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 MSMBP08118 114 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 HIST1H1AQ02539 215 aaPredicted RBP8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 FAM104BQ5XKR9 115 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LAMTOR2Q9Y2Q5 125 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LINC01546A6NGU7 62 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 NTF3P20783 257 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 PET117Q6UWS5 81 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 PAM16Q9Y3D7 125 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 NCOR2Q9Y618 2525 aa8.25□□□□□ -1.09
TRAF3IP2-201ENST00000340026 CHD8Q9HCK8 2581 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TRAV9-2A0A087WT02 112 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 SLC25A16P16260 332 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 NUTF2P61970 127 aaKnown RBP8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 VGLL1Q99990 258 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 PKD1L2Q7Z442 2459 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TRAV8-2A0A0B4J237 113 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TRAV40A0A0B4J280 105 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 B4DSR2 109 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 C9orf139Q6ZV77 190 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 HSPB8Q9UJY1 196 aa8.24□□□□□ -1.09
TRAF3IP2-201ENST00000340026 WNK2Q9Y3S1 2297 aa8.23□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TRBV7-9A0A0J9YWB2 115 aa8.23□□□□□ -1.09
TRAF3IP2-201ENST00000340026 TMEM89A2RUT3 159 aa8.23□□□□□ -1.09
TRAF3IP2-201ENST00000340026 EREGO14944 169 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms