RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
SEMA4D-201ENST00000339861 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
SEMA4D-201ENST00000339861 NOTCH2Q04721 2471 aa8.81□□□□□ -1
SEMA4D-201ENST00000339861 PSG3Q16557 428 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 C5orf64Q2M2E5 130 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 RUSC1-AS1Q66K80 236 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 FAM71F2Q6NXP2 309 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 IGKV1D-37A0A075B6S9 117 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 SPRY2O43597 315 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 NDUFB8O95169 186 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 CR1LQ2VPA4 569 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 RASL11AQ6T310 242 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 FAM231DQ6ZW35 169 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 NACAE9PAV3 2078 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 TRBV19A0A075B6N1 114 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 LY6DQ14210 128 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 PET117Q6UWS5 81 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 SHANK2-AS3Q9BTD1 123 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 ST20Q9HBF5 79 aa8.8□□□□□ -1
SEMA4D-201ENST00000339861 IGFL3Q6UXB1 125 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 VMO1Q7Z5L0 202 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 COX11Q9Y6N1 276 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 IGLV2-23P01705 113 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 HIST1H1AQ02539 215 aaPredicted RBP8.79□□□□□ -1
SEMA4D-201ENST00000339861 THAP8Q8NA92 274 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 NDUFA3O95167 84 aa8.79□□□□□ -1
SEMA4D-201ENST00000339861 CCDC168Q8NDH2 2452 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 SHISA9B4DS77 424 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 K7ERU9 68 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 IGKV1-17P01599 117 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 HBDP02042 147 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 FAM120AOSQ5T036 256 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 VKORC1Q9BQB6 163 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 G3V318 75 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 TRGV3P03979 118 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 UBE2V1Q13404 147 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 ARL6IP6Q8N6S5 226 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 PEF1Q9UBV8 284 aaKnown RBP8.78□□□□□ -1
SEMA4D-201ENST00000339861 MUC3AQ02505 3323 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 TNFRSF14Q92956 283 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 PHLDA3Q9Y5J5 127 aa8.78□□□□□ -1
SEMA4D-201ENST00000339861 GP9P14770 177 aa8.77□□□□□ -1
SEMA4D-201ENST00000339861 SRSF9Q13242 221 aaKnown RBP eCLIP8.77□□□□□ -1
SEMA4D-201ENST00000339861 BRD3OSQ6XYD6 125 aa8.77□□□□□ -1
SEMA4D-201ENST00000339861 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1
SEMA4D-201ENST00000339861 VGLL1Q99990 258 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 CCL25O15444 150 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 ZNF491Q8N8L2 437 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 PCSK5Q92824 1860 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 SONP18583 2426 aaKnown RBP8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 H3BVH4 76 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 LTAP01374 205 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
SEMA4D-201ENST00000339861 Q71RC1 249 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 BCL6BQ8N143 479 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 MRPS16Q9Y3D3 137 aaKnown RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 USP9XQ93008 2570 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 MAP1AP78559 2803 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 FABP2P12104 132 aa8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 LINC00311Q8N616 119 aa8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 NHP2Q9NX24 153 aaKnown RBP8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 PLP1P60201 277 aa8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 MSRB1Q9NZV6 116 aa8.76□□□□□ -1.01
SEMA4D-201ENST00000339861 RPS20P60866 119 aaKnown RBP8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 Q6AWC8 147 aa8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 OR10J6PQ8NGY7 276 aa8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 CFAP47Q6ZTR5 3102 aa8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 GATA1P15976 413 aaPredicted RBP8.75□□□□□ -1.01
SEMA4D-201ENST00000339861 SCGB1C2P0DMR2 95 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 FAM106AQ4KMX7 169 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 ORAOV1Q8WV07 137 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 EEF1AKMT3Q96AZ1 226 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 SIGLEC8Q9NYZ4 499 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 ZNF492Q9P255 531 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 SPCS1Q9Y6A9 102 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 HIVEP3Q5T1R4 2406 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 H7C2G1 150 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 K7EIM0 57 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 CEACAM4O75871 244 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 NPYP01303 97 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 LCNL1Q6ZST4 164 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 PIEZO1Q92508 2521 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 ASPMQ8IZT6 3477 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 LOC107984156A0A0G2JMH3 177 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 VWC2LB2RUY7 222 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 MRPL51Q4U2R6 128 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 ARL17AQ8IVW1 177 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 JKAMPQ9P055 326 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 RNASE4P34096 147 aaKnown RBP8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 TTTY13Q9BZ97 58 aa8.74□□□□□ -1.01
SEMA4D-201ENST00000339861 K7EMI3 77 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms