RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 RASL11AQ6T310 242 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 FRZBQ92765 325 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 SGK494Q96LW2 274 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
HPS1-202ENST00000338546 TEX15Q9BXT5 2789 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 PDZD2O15018 2839 aa12.45□□□□□ -0.42
HPS1-202ENST00000338546 TRAV8-1A0A0A6YYK1 113 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 IZUMO1RA6ND01 250 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 NPIPB6E9PJ23 425 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 P01737 135 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 BMI1P35226 326 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 WDR73Q6P4I2 378 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 RPP21Q9H633 154 aaKnown RBP12.44□□□□□ -0.42
HPS1-202ENST00000338546 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
HPS1-202ENST00000338546 NAT8BQ9UHF3 227 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 UNC79Q9P2D8 2635 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
HPS1-202ENST00000338546 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 A8MWL6 223 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 ZNF207O43670 478 aaKnown RBP12.43□□□□□ -0.42
HPS1-202ENST00000338546 LGALS1P09382 135 aaKnown RBP12.43□□□□□ -0.42
HPS1-202ENST00000338546 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 GNB1LQ9BYB4 327 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 UFC1Q9Y3C8 167 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 TRAPPC1Q9Y5R8 145 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 MT-ND6P03923 174 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 LCNL1Q6ZST4 164 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
HPS1-202ENST00000338546 FASNP49327 2511 aaKnown RBP12.42□□□□□ -0.42
HPS1-202ENST00000338546 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
HPS1-202ENST00000338546 HOXA5P20719 270 aa12.42□□□□□ -0.42
HPS1-202ENST00000338546 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
HPS1-202ENST00000338546 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
HPS1-202ENST00000338546 IGHV3-66A0A0C4DH42 116 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 CT45A10P0DMU9 189 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 FABP9Q0Z7S8 132 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 LINC00322Q6ZN03 302 aaPredicted RBP12.41□□□□□ -0.42
HPS1-202ENST00000338546 REC114Q7Z4M0 266 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 ATP5L2Q7Z4Y8 100 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 SMPXQ9UHP9 88 aa12.41□□□□□ -0.42
HPS1-202ENST00000338546 IGHV3OR16-13A0A075B7E8 117 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 IGHV3-74A0A0B4J1X5 117 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 TRAV8-2A0A0B4J237 113 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 LGALS9O00182 355 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 COA6Q5JTJ3 125 aaKnown RBP12.4□□□□□ -0.42
HPS1-202ENST00000338546 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 ZC2HC1AQ96GY0 325 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 PRR25Q96S07 402 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 NDFIP1Q9BT67 221 aa12.4□□□□□ -0.42
HPS1-202ENST00000338546 IGHV3-49A0A0A0MS15 119 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 DNAJC9-AS1A6NH13 148 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 FOXA3P55318 350 aaPredicted RBP12.39□□□□□ -0.43
HPS1-202ENST00000338546 NDUFA6P56556 154 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 C10orf99Q6UWK7 81 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 C16orf92Q96LL3 132 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 RHPN1-AS1Q9BWJ2 59 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 FLNAP21333 2647 aaKnown RBP12.39□□□□□ -0.43
HPS1-202ENST00000338546 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
HPS1-202ENST00000338546 A8MWP6 167 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
HPS1-202ENST00000338546 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
HPS1-202ENST00000338546 NEU1Q99519 415 aa12.39□□□□□ -0.43
HPS1-202ENST00000338546 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
HPS1-202ENST00000338546 HLA-DQA1P01909 254 aa12.38□□□□□ -0.43
HPS1-202ENST00000338546 HLA-DMBP28068 263 aa12.38□□□□□ -0.43
HPS1-202ENST00000338546 TCL1AP56279 114 aa12.38□□□□□ -0.43
HPS1-202ENST00000338546 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
HPS1-202ENST00000338546 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
HPS1-202ENST00000338546 NRN1Q9NPD7 142 aa12.38□□□□□ -0.43
HPS1-202ENST00000338546 ITPR2Q14571 2701 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 MXRA5Q9NR99 2828 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 HIGD1CA8MV81 97 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 ZNF705FA8MVS1 300 aaPredicted RBP12.37□□□□□ -0.43
HPS1-202ENST00000338546 SOCS3O14543 225 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 S100A8P05109 93 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 TM4SF20Q53R12 229 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 FAM162BQ5T6X4 162 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 Q6AWC8 147 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
HPS1-202ENST00000338546 C9orf47Q6ZRZ4 202 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 VGLL1Q99990 258 aa12.37□□□□□ -0.43
HPS1-202ENST00000338546 ZNF469Q96JG9 3925 aaPredicted RBP12.36□□□□□ -0.43
HPS1-202ENST00000338546 FAM181BA6NEQ2 426 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 SNURFLB1AK76 121 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 OVOL1O14753 267 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 CBLN1P23435 193 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 CRIP1P50238 77 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 SMUG1Q53HV7 270 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 IGFL4Q6B9Z1 124 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 TMEM136Q6ZRR5 245 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms