RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 ZNF575Q86XF7 245 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 CLEC5AQ9NY25 188 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 SH2D1AO60880 128 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 BATFQ16520 125 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 PRR25Q96S07 402 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 SPTBN4Q9H254 2564 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 NPFFO15130 113 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 UQCR10Q9UDW1 63 aa11.18□□□□□ -0.62
ARHGEF1-201ENST00000337665 A0A087X0K7 114 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
ARHGEF1-201ENST00000337665 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 GNLYP22749 145 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 RHOGP84095 191 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 LINC00173Q6ZV60 143 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 VGLL1Q99990 258 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 WNK2Q9Y3S1 2297 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 VPS13CQ709C8 3753 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 C20orf202A1L168 122 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 NPSP0C0P6 89 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 GPR183P32249 361 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 U3KQK5 164 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 BUB3O43684 328 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 CLEC3BP05452 202 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
ARHGEF1-201ENST00000337665 TMEM189A5PLL7 270 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 PRSS47A8MTI9 375 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 ZNF138P52744 262 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 PAX8Q06710 450 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 KLHDC1Q8N7A1 406 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 G3V318 75 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 SRSF2Q01130 221 aaKnown RBP11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
ARHGEF1-201ENST00000337665 ABCA2Q9BZC7 2435 aa11.15□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGLL1P15814 213 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 RAB9AP51151 201 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.14□□□□□ -0.63
ARHGEF1-201ENST00000337665 SPTBN1Q01082 2364 aaKnown RBP11.13□□□□□ -0.63
ARHGEF1-201ENST00000337665 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
ARHGEF1-201ENST00000337665 CRIP2P52943 208 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF1-201ENST00000337665 Q8TAT8 98 aa11.13□□□□□ -0.63
ARHGEF1-201ENST00000337665 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGLC6P0CF74 106 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 TMEM213A2RRL7 107 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 GOSR1O95249 250 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 CLEC19AQ6UXS0 136 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 Q6ZN92 141 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 RPS20P60866 119 aaKnown RBP11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 EEF1AKMT3Q96AZ1 226 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 U3KQE9 123 aa11.12□□□□□ -0.63
ARHGEF1-201ENST00000337665 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
ARHGEF1-201ENST00000337665 TSPOP30536 169 aa11.11□□□□□ -0.63
ARHGEF1-201ENST00000337665 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
ARHGEF1-201ENST00000337665 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
ARHGEF1-201ENST00000337665 BMI1P35226 326 aa11.11□□□□□ -0.63
ARHGEF1-201ENST00000337665 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 CSN3P07498 182 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 ERCC8Q13216 396 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 PET117Q6UWS5 81 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 TRAV8-2A0A0B4J237 113 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGHV1-69DA0A0B4J2H0 117 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 IGHV1-69P01742 117 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 MEGF9Q9H1U4 602 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 PPP1R14DQ9NXH3 145 aa11.1□□□□□ -0.63
ARHGEF1-201ENST00000337665 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms