RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TRBV12-3P01733 135 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 HLA-DRB1P01911 266 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 Q8TAT8 98 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 PIFOQ8TCI5 191 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 ORAOV1Q8WV07 137 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 MRPL27Q9P0M9 148 aaKnown RBP9.81□□□□□ -0.84
LIMK1-201ENST00000336180 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 POLR3KQ9Y2Y1 108 aaPredicted RBP9.81□□□□□ -0.84
LIMK1-201ENST00000336180 IGKV2-40A0A087WW87 121 aaPredicted RBP9.8□□□□□ -0.84
LIMK1-201ENST00000336180 TMEM8BA6NDV4 472 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 IGKV2D-40P01614 121 aaPredicted RBP9.8□□□□□ -0.84
LIMK1-201ENST00000336180 TCRAP04437 139 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 TDRG1Q3Y452 100 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 COX6B1P14854 86 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 PAX8Q06710 450 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 RNF182Q8N6D2 247 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 MTORP42345 2549 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 TGFAP01135 160 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 GCGP01275 180 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 RAB9AP51151 201 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 C10orf99Q6UWK7 81 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 GBGT1Q8N5D6 347 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 C1RLQ9NZP8 487 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 CDC42EP3Q9UKI2 254 aa9.8□□□□□ -0.84
LIMK1-201ENST00000336180 MSMBP08118 114 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 OR4F17Q8NGA8 305 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 ITPR2Q14571 2701 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 VWC2LB2RUY7 222 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 TOMM40O96008 361 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 MYCNOSP40205 109 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 ID1P41134 155 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 DEFB1P60022 68 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 BPIFA4PQ86YQ2 179 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 C8orf49Q96NF6 230 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 KLK15Q9H2R5 256 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
LIMK1-201ENST00000336180 KIR2DL5BA0A0G2JN68 375 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 KIR2DL5BA0A0G2JPC4 375 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 NPIPB5A8MRT5 1133 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 H3BRN7 92 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
LIMK1-201ENST00000336180 FOXL1Q12952 345 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 EBI3Q14213 229 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 IL17RELQ6ZVW7 336 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 KIR2DL5AQ8N109 375 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 IQCJQ1A5X6 159 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 K7ERU9 68 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 ZNF705DP0CH99 300 aaPredicted RBP9.78□□□□□ -0.84
LIMK1-201ENST00000336180 ZNF705BP0CI00 300 aaPredicted RBP9.78□□□□□ -0.84
LIMK1-201ENST00000336180 CD99P14209 185 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 TOMM20LQ6UXN7 152 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 C5orf17Q8NAS9 161 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 SORL1Q92673 2214 aa9.78□□□□□ -0.84
LIMK1-201ENST00000336180 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 HIGD1CA8MV81 97 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 SAP30O75446 220 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 BTF3L4Q96K17 158 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 SMPXQ9UHP9 88 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 ARL2-SNX15V9GYD0 113 aa9.77□□□□□ -0.84
LIMK1-201ENST00000336180 FLNAP21333 2647 aaKnown RBP9.77□□□□□ -0.85
LIMK1-201ENST00000336180 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 TRGV3P03979 118 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 THYN1Q9P016 225 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 A4D1N5 150 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 EDN2P20800 178 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 NUP35Q8NFH5 326 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
LIMK1-201ENST00000336180 ITPR3Q14573 2671 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 OOSP1A8MZH6 123 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 TPPP2P59282 170 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 ERCC8Q13216 396 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 TMEM183BQ1AE95 376 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 TMEM183AQ8IXX5 376 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 IGLC2P0DOY2 106 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 SRD5A1P18405 259 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 PLP1P60201 277 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 BAGE3Q86Y29 109 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 GPR82Q96P67 336 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 SMAD5-AS1Q9Y6J3 95 aa9.76□□□□□ -0.85
LIMK1-201ENST00000336180 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 FOXA3P55318 350 aaPredicted RBP9.75□□□□□ -0.85
LIMK1-201ENST00000336180 VAMP3Q15836 100 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 MIEN1Q9BRT3 115 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 OSTCQ9NRP0 149 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms