RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SPINK4O60575 86 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 CBLN1P23435 193 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 MEOX2P50222 304 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 CT83Q5H943 113 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 C10orf99Q6UWK7 81 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 ZC2HC1AQ96GY0 325 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 CCDC168Q8NDH2 2452 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 NBPF19A0A087WUL8 3843 aa11.45□□□□□ -0.58
TPM3-205ENST00000328159 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
TPM3-205ENST00000328159 FBLL1A6NHQ2 334 aaKnown RBP11.44□□□□□ -0.58
TPM3-205ENST00000328159 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
TPM3-205ENST00000328159 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
TPM3-205ENST00000328159 SLC35B1P78383 322 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 LCN12Q6JVE5 192 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 GLMPQ8WWB7 406 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 ASCL2Q99929 193 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 PEF1Q9UBV8 284 aaKnown RBP11.44□□□□□ -0.58
TPM3-205ENST00000328159 NAT8BQ9UHF3 227 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 COX19Q49B96 90 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 NEU1Q99519 415 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 GNB1LQ9BYB4 327 aa11.44□□□□□ -0.58
TPM3-205ENST00000328159 XKRY2A2RUG3 117 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 ZNF705FA8MVS1 300 aaPredicted RBP11.43□□□□□ -0.58
TPM3-205ENST00000328159 A8MWL6 223 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 SNURFLB1AK76 121 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
TPM3-205ENST00000328159 WDR73Q6P4I2 378 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 LINC00518Q8N0U6 118 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
TPM3-205ENST00000328159 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
TPM3-205ENST00000328159 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 MT-ND6P03923 174 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 FOXE3Q13461 319 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 HIST3H2BBQ8N257 126 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 PDZD2O15018 2839 aa11.42□□□□□ -0.58
TPM3-205ENST00000328159 A0A1W2PS18 150 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 S100A8P05109 93 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
TPM3-205ENST00000328159 ELANEP08246 267 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
TPM3-205ENST00000328159 Q8N2B8 174 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 DUX5Q96PT3 197 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 VGLL1Q99990 258 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 KRTAP1-1Q07627 177 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 SAPCD1Q5SSQ6 148 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 TCF24Q7RTU0 167 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 TMEM86BQ8N661 226 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 GFRA4Q9GZZ7 299 aa11.41□□□□□ -0.58
TPM3-205ENST00000328159 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
TPM3-205ENST00000328159 PRAC2D3DTV9 90 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 CT45A10P0DMU9 189 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 CRIP1P50238 77 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 FAM106AQ4KMX7 169 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
TPM3-205ENST00000328159 GTSF1Q8WW33 167 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 MRPL53Q96EL3 112 aaKnown RBP11.4□□□□□ -0.58
TPM3-205ENST00000328159 PRR25Q96S07 402 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
TPM3-205ENST00000328159 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 CD5LO43866 347 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 RAB4BP61018 213 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 TM4SF20Q53R12 229 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 PDZD11Q5EBL8 140 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 Q8TAT8 98 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
TPM3-205ENST00000328159 CLEC5AQ9NY25 188 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 UNC79Q9P2D8 2635 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 MXRA5Q9NR99 2828 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 FAM231BA6NCW3 169 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 K7EMT4 169 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 HLA-DQA1P01909 254 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 RNF152Q8N8N0 203 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 C16orf92Q96LL3 132 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
TPM3-205ENST00000328159 LGALS1P09382 135 aaKnown RBP11.38□□□□□ -0.59
TPM3-205ENST00000328159 S100A2P29034 98 aa11.38□□□□□ -0.59
TPM3-205ENST00000328159 ERCC8Q13216 396 aa11.38□□□□□ -0.59
TPM3-205ENST00000328159 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
TPM3-205ENST00000328159 YAE1D1Q9NRH1 226 aa11.38□□□□□ -0.59
TPM3-205ENST00000328159 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
TPM3-205ENST00000328159 SH2D1AO60880 128 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms