RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 PRAC2D3DTV9 90 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 PMS2P11Q13670 270 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 ARL6IP6Q8N6S5 226 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 ZNF738Q8NE65 137 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 RPUSD4Q96CM3 377 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 YTHDF2Q9Y5A9 579 aaKnown RBP9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 A0A0J9YX75 114 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 PGPA6NDG6 321 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 FAM74A7A6NL05 159 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 F6UB75 175 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 TEX46H3BTG2 121 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 NMBP08949 121 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 GDF5OSQ5U4N7 250 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 LINC00322Q6ZN03 302 aaPredicted RBP9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
CHMP2A-201ENST00000312547 A8MTW9 85 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 H3BMM0 161 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 PPT1P50897 306 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 UBE2G2P60604 165 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 ACTL10Q5JWF8 245 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 TRPT1Q86TN4 253 aaKnown RBP9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 CLUHP3Q96NS8 147 aa9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
CHMP2A-201ENST00000312547 RBMY1BA6NDE4 496 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 RBMY1EA6NEQ0 496 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 PAGE4O60829 102 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 RBMY1DP0C7P1 496 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 PRB4P10163 310 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 SUMO1P63165 101 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 EBLN2Q6P2I7 272 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 ZNF767PQ75MW2 155 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
CHMP2A-201ENST00000312547 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 ZNF705DP0CH99 300 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 ZNF705BP0CI00 300 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 CSN1S1P47710 185 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 ATP5G3P48201 142 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 DEFA6Q01524 100 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 STHQ8IWL8 128 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 EPDR1Q9UM22 224 aa9.31□□□□□ -0.92
CHMP2A-201ENST00000312547 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 TCRAP04437 139 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 SLC25A5P05141 298 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 FRMD6-AS1P0C7T7 363 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 GNG5P63218 68 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 HIST1H1AQ02539 215 aaPredicted RBP9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 CST9LP1Q5W188 147 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 TCEAL7Q9BRU2 100 aa9.3□□□□□ -0.92
CHMP2A-201ENST00000312547 LOC102724200A0A096LPH7 203 aaPredicted RBP9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 RBAKDNA6NC62 111 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 IFNA1P01562 189 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 BCL2P10415 239 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 C9orf47Q6ZRZ4 202 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 MRAPQ8TCY5 172 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 VGLL1Q99990 258 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
CHMP2A-201ENST00000312547 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 RGS13O14921 159 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 ERCC8Q13216 396 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 HAGHQ16775 308 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 GOLT1AQ6ZVE7 132 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 OR4B1Q8NGF8 309 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 KIR2DL5BQ8NHK3 375 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 HIST1H2BAQ96A08 127 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
CHMP2A-201ENST00000312547 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms