RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IGKV1-9A0A0C4DH69 117 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 EVI2AP22794 236 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 SLAQ13239 276 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 PDE6HQ13956 83 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 GAFA1Q96PS6 74 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 PRIMA1Q86XR5 153 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 ZNF114Q8NC26 417 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 FCN3O75636 299 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 SUPT4H1P63272 117 aaKnown RBP6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 CD300EQ496F6 205 aaPredicted RBP6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 IFI27L1Q96BM0 104 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 SPRY4Q9C004 299 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 PROK2Q9HC23 129 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 DSCAML1Q8TD84 2053 aa6.78□□□□□ -1.32
PCDHB1-201ENST00000306549 A0A1B0GV90 55 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 SNAI2O43623 268 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 MMP23AO75900 390 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LRRC75A-AS1Q8N1F1 130 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 WFDC12Q8WWY7 111 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LYNX1G3V0Z9 82 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LDLRAD4O15165 306 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LYNX1P0DP58 116 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 ESDP10768 282 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LINC01619G3V211 115 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 RNF138Q8WVD3 245 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 GNG5P63218 68 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 IL17RELQ6ZVW7 336 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LY6G5BQ8NDX9 201 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 PRR30Q53SZ7 412 aaPredicted RBP6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 TMEM158Q8WZ71 300 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 LINC00527Q9UJ94 153 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF98A6NK75 572 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 CRLF1O75462 422 aa6.77□□□□□ -1.33
PCDHB1-201ENST00000306549 NPIPB5A8MRT5 1133 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 UBE2BP63146 152 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 PLPPR1Q8TBJ4 325 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 SIGLEC9Q9Y336 463 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 A0A1B0GWJ7 208 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 ELANEP08246 267 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 MTORP42345 2549 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 NMBP08949 121 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 KLF5Q13887 457 aaPredicted RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 CR1LQ2VPA4 569 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 FAM110DQ8TAY7 271 aaPredicted RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 LSM4Q9Y4Z0 139 aaKnown RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 POLQO75417 2590 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 A0A087WWC5 75 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 H0YJW9 148 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 GATA2P23769 480 aaPredicted RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 PPIFP30405 207 aaKnown RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 PAQR4Q8N4S7 273 aaPredicted RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 H3BUT2 72 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 ATP5G3P48201 142 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 C1orf194Q5T5A4 169 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 Q6P435 159 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 TSKUQ8WUA8 353 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 HSD52Q0P140 79 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 TSSC4Q9Y5U2 329 aaPredicted RBP6.76□□□□□ -1.33
PCDHB1-201ENST00000306549 C2CD3Q4AC94 2353 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 IGHV2-5P01817 119 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 BRD3OSQ6XYD6 125 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 TRPT1Q86TN4 253 aaKnown RBP6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 EPG5Q9HCE0 2579 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 FXYD7P58549 80 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 GAGE13Q4V321 117 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 FGFBP3Q8TAT2 258 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 GNB1LQ9BYB4 327 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 VPREB3Q9UKI3 123 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 C2orf82Q6UX34 121 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 ZNF479Q96JC4 524 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 FSTL3O95633 263 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 RPL15P61313 204 aaKnown RBP6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 SFTA2Q6UW10 78 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 IMMP2LQ96T52 175 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 RNASE7Q9H1E1 156 aaKnown RBP6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 MLNRO43193 412 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 NPC2P61916 151 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 TMEM256Q8N2U0 113 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 TAL2Q16559 108 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 ZFAND6Q6FIF0 208 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 RHPN1-AS1Q9BWJ2 59 aa6.75□□□□□ -1.33
PCDHB1-201ENST00000306549 MST1LQ2TV78 715 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 ZCCHC24Q8N2G6 241 aaKnown RBP6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 C18orf12Q96KH6 178 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 ATP6V0BQ99437 205 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 IGKV1D-17A0A075B6S4 117 aa6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 IGKV2-40A0A087WW87 121 aaPredicted RBP6.74□□□□□ -1.33
PCDHB1-201ENST00000306549 NDUFS5O43920 106 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms