RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 RTL8BQ17RB0 113 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 RRN3P1Q2M238 152 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 SLC25A30Q5SVS4 291 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 UNQ9165/PRO28630Q6UXU0 137 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 ATP5L2Q7Z4Y8 100 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 NR2C2APQ86WQ0 139 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 MSRB3Q8IXL7 192 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 LINC01560Q8TB33 94 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 C10orf105Q8TEF2 133 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 AQP3Q92482 292 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 RTL8AQ9BWD3 113 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 CACNG5Q9UF02 275 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 ZNF256Q9Y2P7 627 aaPredicted RBP3.64□□□□□ -1.83
ZNF560-201ENST00000301480 ABCA2Q9BZC7 2435 aa3.64□□□□□ -1.83
ZNF560-201ENST00000301480 NINQ8N4C6 2090 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 PRRC2AP48634 2157 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 FAM24AA6NFZ4 105 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SRSF10O75494 262 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SRP19P09132 144 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 CRISP2P16562 243 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SMIM4Q8WVI0 70 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 RBMXL1Q96E39 390 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 PMCHL2Q9BQD1 86 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SLC39A9Q9NUM3 307 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 PRR13Q9NZ81 148 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 HIVEP1P15822 2718 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SPENQ96T58 3664 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 CRYBG3Q68DQ2 2970 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 A8MWL6 223 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 RRHO14718 337 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 GHRHP01286 108 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 IGHV3-7P01780 117 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 TRACP01848 142 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 HSPB1P04792 205 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 NCBP2P52298 156 aaKnown RBP eCLIP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 RPL18AQ02543 176 aaKnown RBP3.63□□□□□ -1.83
ZNF560-201ENST00000301480 PAX8Q06710 450 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 NOXRED1Q6NXP6 359 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 AMTNQ6UX39 209 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 OR10G2Q8NGC3 310 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 OR51H1Q8NH63 302 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 GTSF1Q8WW33 167 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 SLC25A38Q96DW6 304 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 GABARAPL1Q9H0R8 117 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 TNFRSF19Q9NS68 423 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 HILPDAQ9Y5L2 63 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 TRAPPC1Q9Y5R8 145 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 PXMP4Q9Y6I8 212 aa3.63□□□□□ -1.83
ZNF560-201ENST00000301480 ANKHD1Q8IWZ3 2542 aaKnown RBP3.62□□□□□ -1.83
ZNF560-201ENST00000301480 MED13LQ71F56 2210 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 PCNX1Q96RV3 2341 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 TRBV6-7A0A0A0MS04 114 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 C5orf49A4QMS7 147 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 FAM220BPB1ANY3 271 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 PRYO14603 147 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 ZNHIT1O43257 154 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 ZNF688P0C7X2 276 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 Q56UQ5 140 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 GGNQ86UU5 652 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 CLEC7AQ9BXN2 247 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 FIS1Q9Y3D6 152 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 IGKV3D-15A0A087WSY6 115 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 A0A1B0GV50 99 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 A0A1B0GXF2 115 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 GYPAP02724 150 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 INAFM2P0DMQ5 153 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 SLC25A16P16260 332 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 PSMB8P28062 276 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 ASIPP42127 132 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 CLDN17P56750 224 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 ECSCRQ19T08 205 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 C19orf54Q5BKX5 351 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 RPL7L1Q6DKI1 246 aaKnown RBP3.62□□□□□ -1.83
ZNF560-201ENST00000301480 BAGE3Q86Y29 109 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 BAGE2Q86Y30 109 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 TMEM99Q8N816 258 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 CNEP1R1Q8N9A8 125 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 PPDPFLQ8WWR9 84 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 FXYD5Q96DB9 178 aa3.62□□□□□ -1.83
ZNF560-201ENST00000301480 INTS1Q8N201 2190 aaKnown RBP3.62□□□□□ -1.83
ZNF560-201ENST00000301480 DSPPQ9NZW4 1301 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 C3orf85A0A1B0GTC6 90 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 TIMM23O14925 209 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 PPP1R3DO95685 299 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 LY6G6DO95868 133 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 CD7P09564 240 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 ERVK-16P61578 105 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 COX8CQ7Z4L0 72 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 OR2T10Q8NGZ9 312 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 FGFBP3Q8TAT2 258 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 SHANK2-AS3Q9BTD1 123 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 LIME1Q9H400 295 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 SDF2L1Q9HCN8 221 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 EXPH5Q8NEV8 1989 aa3.61□□□□□ -1.83
ZNF560-201ENST00000301480 A0A1B0GTL3 188 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms