RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CLEC3BP05452 202 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 ORMDL3Q8N138 153 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
CDT1-201ENST00000301019 JPT1Q9UK76 154 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 HAX1O00165 279 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 UPK2O00526 184 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 SMCPP49901 116 aaPredicted RBP11.45□□□□□ -0.58
CDT1-201ENST00000301019 Q8TAT8 98 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 MRPL35Q9NZE8 188 aaKnown RBP11.45□□□□□ -0.58
CDT1-201ENST00000301019 LINC01549A6NIU2 74 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
CDT1-201ENST00000301019 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 ID1P41134 155 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 GAGE6Q13070 117 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 HLA-DRB4X5D2U9 266 aa11.45□□□□□ -0.58
CDT1-201ENST00000301019 IGKV1D-37A0A075B6S9 117 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 WI2-2373I1.2A0A1W2PRP0 233 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 SPRY2O43597 315 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 RBP4P02753 201 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 ZNF785A8K8V0 405 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 TSPAN13O95857 204 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 IGKCP01834 107 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 FOLR3P41439 243 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 EFNA4P52798 201 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 C5orf64Q2M2E5 130 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
CDT1-201ENST00000301019 NBASA2RRP1 2371 aa11.44□□□□□ -0.58
CDT1-201ENST00000301019 CRIP1P50238 77 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 TEX29Q8N6K0 151 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 DSCAMO60469 2012 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 TRAV26-2A0A0B4J265 109 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 BRI3O95415 125 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 EMP1P54849 157 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 HIF1ANQ9NWT6 349 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 CD59P13987 128 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 AJUBAQ96IF1 538 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 HHLA3Q9XRX5 114 aa11.43□□□□□ -0.58
CDT1-201ENST00000301019 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 DNPH1O43598 174 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 RITA1Q96K30 269 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 CCL13Q99616 98 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 PRO0461Q9UI25 63 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 WISP2O76076 250 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
CDT1-201ENST00000301019 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
CDT1-201ENST00000301019 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
CDT1-201ENST00000301019 ODF1Q14990 250 aa11.41□□□□□ -0.58
CDT1-201ENST00000301019 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
CDT1-201ENST00000301019 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
CDT1-201ENST00000301019 IL11RAQ14626 422 aa11.41□□□□□ -0.58
CDT1-201ENST00000301019 C2orf83Q53S99 150 aa11.41□□□□□ -0.58
CDT1-201ENST00000301019 PCSK5Q92824 1860 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 SCGB1D4Q6XE38 83 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 CRLF1O75462 422 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 IL4P05112 153 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 CT45A10P0DMU9 189 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 CCL3L1P16619 93 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 MYCNOSP40205 109 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 Q6AWC8 147 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 ZCCHC24Q8N2G6 241 aaKnown RBP11.4□□□□□ -0.58
CDT1-201ENST00000301019 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 CITED1Q99966 193 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 CXXC4Q9H2H0 198 aa11.4□□□□□ -0.58
CDT1-201ENST00000301019 KLF17Q5JT82 389 aaPredicted RBP11.39□□□□□ -0.59
CDT1-201ENST00000301019 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
CDT1-201ENST00000301019 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
CDT1-201ENST00000301019 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
CDT1-201ENST00000301019 C17orf58Q2M2W7 97 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 VKORC1Q9BQB6 163 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 HOXA3O43365 443 aaPredicted RBP11.39□□□□□ -0.59
CDT1-201ENST00000301019 ORM1P02763 201 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 OR1L8Q8NGR8 309 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 RPEQ96AT9 228 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 TTTY12Q9BZ98 90 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
CDT1-201ENST00000301019 TRAV4A0A0B4J268 109 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 FSTL3O95633 263 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 Q6ZQT7 251 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 ZNF714Q96N38 554 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 KLF12Q9Y4X4 402 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 ABCA4P78363 2273 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 IGLV2-11P01706 119 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 TCF15Q12870 199 aa11.38□□□□□ -0.59
CDT1-201ENST00000301019 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms