RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 TRBV7-1A0A0A6YYK4 115 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 TRAV12-3A0A0B4J271 114 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 HLA-DRB4P13762 266 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 SLC25A16P16260 332 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 CFAP161Q6P656 301 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 HLA-DRB4X5D2U9 266 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 A0A0G2JNJ9 132 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 PLA2G2CQ5R387 149 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 EDA2RQ9HAV5 297 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 Q9UFV3 132 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 NUP210Q8TEM1 1887 aaPredicted RBP14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHV1-3A0A0C4DH29 117 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 K7ENP7 123 aa14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 CEACAM8P31997 349 aaPredicted RBP14.13□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHV3-66A0A0C4DH42 116 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 PAX8Q06710 450 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 TIMM21Q9BVV7 248 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 HIGD1BQ9P298 99 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 SIGLEC9Q9Y336 463 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 SPAG8Q99932 426 aaPredicted RBP14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 TRBV19A0A075B6N1 114 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 ACYP1P07311 99 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 PPIFP30405 207 aaKnown RBP14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 CMC4P56277 68 aaPredicted RBP14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 MRPL51Q4U2R6 128 aaKnown RBP14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 LY6G5BQ8NDX9 201 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 SCRT2Q9NQ03 307 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 SIGLEC8Q9NYZ4 499 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 K7EN84 100 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 LTAP01374 205 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 GAFA1Q96PS6 74 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 DENND4CQ5VZ89 1909 aa14.12□□□□□ -0.15
PCDHA13-201ENST00000289272 F8VRH5 84 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 LYPD6Q86Y78 171 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 PRO1854Q9UHT4 67 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHV3OR16-13A0A075B7E8 117 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHV3-74A0A0B4J1X5 117 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 PMVKQ15126 192 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 RNASE8Q8TDE3 154 aaKnown RBP14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 RSPO1Q2MKA7 263 aaPredicted RBP14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 TMEM200BQ69YZ2 307 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 LINC00479Q96M42 142 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 B4DSR2 109 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 TIMM23O14925 209 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 C12orf74Q32Q52 190 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 LHFPL4Q7Z7J7 247 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 DPH3Q96FX2 82 aa14.11□□□□□ -0.15
PCDHA13-201ENST00000289272 K7EM74 188 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 LEPROTO15243 131 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 IGHG4P01861 327 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 C10orf55Q5SWW7 151 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 SSC4DQ8WTU2 575 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 IGKV1D-17A0A075B6S4 117 aa14.1□□□□□ -0.15
PCDHA13-201ENST00000289272 CFHR2P36980 270 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 GPR179Q6PRD1 2367 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 PLA2G2EQ9NZK7 142 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 SRSF2Q01130 221 aaKnown RBP14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 C20orf78Q9BR46 151 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 IGLC1P0CG04 106 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 DOCK8Q8NF50 2099 aa14.09□□□□□ -0.15
PCDHA13-201ENST00000289272 ZNF833PQ6ZTB9 187 aa14.08□□□□□ -0.15
PCDHA13-201ENST00000289272 ATP6V0E2Q8NHE4 81 aa14.08□□□□□ -0.15
PCDHA13-201ENST00000289272 RNF166Q96A37 237 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 SPTBN2O15020 2390 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 KIAA2026Q5HYC2 2103 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 A0A087WX48 190 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 NPYP01303 97 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 MCRIP2Q9BUT9 160 aaKnown RBP14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 GNLYP22749 145 aa14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 ZNF474Q6S9Z5 364 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 TRPT1Q86TN4 253 aaKnown RBP14.08□□□□□ -0.16
PCDHA13-201ENST00000289272 IGHV3-49A0A0A0MS15 119 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 DTX1Q86Y01 620 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 PRB3Q04118 309 aaPredicted RBP14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 C2orf66Q6UXQ4 117 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 LINC00311Q8N616 119 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 NBL1P41271 181 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 FXYD5Q96DB9 178 aa14.07□□□□□ -0.16
PCDHA13-201ENST00000289272 LYNX1G3V0Z9 82 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 NDUFS7O75251 213 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 LYNX1P0DP58 116 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 LSM4Q9Y4Z0 139 aaKnown RBP14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 G3V4G9 280 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 SMKR1H3BMG3 65 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 C5orf64Q2M2E5 130 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 LINC01587Q99440 93 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 TMEM126AQ9H061 195 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 TOMM7Q9P0U1 55 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 TMEM213A2RRL7 107 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 FXYD7P58549 80 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 LINC00205P59089 165 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 TRAV8-3A0A0A6YYJ7 113 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 FAM223BA6NKX1 122 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 TRACP01848 142 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 FAM223AQ8IWN6 122 aa14.06□□□□□ -0.16
PCDHA13-201ENST00000289272 H3BRN7 92 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 TAX1BP3O14907 124 aa14.05□□□□□ -0.16
PCDHA13-201ENST00000289272 GATA4P43694 442 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms