RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 CGAP01215 116 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 DMRTC1Q5HYR2 192 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 TPTE2P1Q5T6R2 138 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ITLN1Q8WWA0 313 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 RSPO3Q9BXY4 272 aaPredicted RBP6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 COX6A1P12074 109 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 OCC1Q8TAD7 63 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 K7EP34 96 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ATP5G1P05496 136 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ATP5G3P48201 142 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 GAGE4Q13068 117 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 GAGE5Q13069 117 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 GAGE6Q13070 117 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 CENPFP49454 3210 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 TRBV25-1A0A075B6N4 114 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 IGHV2-26A0A0B4J1V2 119 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 UTF1Q5T230 341 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ZFHX2Q9C0A1 2572 aaPredicted RBP6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 WBP1Q96G27 269 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 RHODO00212 210 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 CTSBP07858 339 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 PAX8Q06710 450 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 C20orf204Q6ZNR8 217 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 ZNF503Q96F45 646 aa6.92□□□□□ -1.3
CACNA1D-201ENST00000288139 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 CCL3L1P16619 93 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 IMMP1LQ96LU5 166 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 SIGLEC12Q96PQ1 595 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 WFDC11Q8NEX6 87 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 HAMPP81172 84 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 ATOH7Q8N100 152 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 RNF125Q96EQ8 232 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 TRAV5A0A0B4J249 113 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 COX8AP10176 69 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 RPL35AP18077 110 aaKnown RBP6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 TMEM75Q8N9X5 138 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 HOXB4P17483 251 aaPredicted RBP6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 SRSF3P84103 164 aaKnown RBP6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 VWC2Q2TAL6 325 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 CFHR1Q03591 330 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
CACNA1D-201ENST00000288139 TRAV13-2A0A0B4J235 113 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 A0A0U1RRA0 63 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 USMG5Q96IX5 58 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 TIMM21Q9BVV7 248 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 IGHV3-49A0A0A0MS15 119 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 SHISA8B8ZZ34 492 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 HIGD1BQ9P298 99 aa6.9□□□□□ -1.3
CACNA1D-201ENST00000288139 NBR2O15453 112 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 KIR3DS1Q14943 382 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 VOPP1Q96AW1 172 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 C1orf159Q96HA4 380 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 GATA4P43694 442 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 TFF3Q07654 80 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 Q6ZVH6 145 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 A0A1B0GX51 115 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 HGFACQ04756 655 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 TGIF1Q15583 401 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 STPG4Q8N801 248 aa6.9□□□□□ -1.31
CACNA1D-201ENST00000288139 IGHV3OR16-10A0A075B7F0 116 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 A0A1W2PPE3 182 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 C1QL2Q7Z5L3 287 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 RNASE6Q93091 150 aaKnown RBP6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 RFNGQ9Y644 331 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 GFI1BQ5VTD9 330 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 KLHL30-AS1Q8NEE0 82 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 C17orf98A8MV24 154 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 K7EP13 123 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 LMO1P25800 156 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 SLC22A18ASQ8N1D0 253 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 KLK5Q9Y337 293 aaPredicted RBP6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 SH2D6Q7Z4S9 175 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
CACNA1D-201ENST00000288139 TRAV8-3A0A0A6YYJ7 113 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 FLVCR1-AS1Q8TAF5 88 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 SPXQ9BT56 116 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 COL4A5P29400 1685 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 TMEM14BQ9NUH8 114 aa6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 POLR3KQ9Y2Y1 108 aaPredicted RBP6.88□□□□□ -1.31
CACNA1D-201ENST00000288139 PTPRSQ13332 1948 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms