RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 TRPT1Q86TN4 253 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 TUBGCP6Q96RT7 1819 aa11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-201ENST00000283351 CCL18P55774 89 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 NTF4P34130 210 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 SPOCK3Q9BQ16 436 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 PTPRFP10586 1907 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 CDKN1BP46527 198 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 PMVKQ15126 192 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 RNF144BQ7Z419 303 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 Q8TCH9 128 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 SRSF8Q9BRL6 282 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 Q6ZR03 302 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 FREM3P0C091 2139 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 RNF222A6NCQ9 220 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 NDUFA4O00483 81 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 RNF126Q9BV68 326 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 DMRT1Q9Y5R6 373 aa11.84□□□□□ -0.51
TRAPPC8-201ENST00000283351 IGHV2-5P01817 119 aa11.83□□□□□ -0.51
TRAPPC8-201ENST00000283351 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.51
TRAPPC8-201ENST00000283351 H3BUT2 72 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 HIST1H4AP62805 103 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 AGMATQ9BSE5 352 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 KIAA2026Q5HYC2 2103 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 ITGB1BP1O14713 200 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 ZNF407Q9C0G0 2248 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 WFDC1Q9HC57 220 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
TRAPPC8-201ENST00000283351 KLF12Q9Y4X4 402 aa11.82□□□□□ -0.52
TRAPPC8-201ENST00000283351 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-201ENST00000283351 SONP18583 2426 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-201ENST00000283351 DDTP30046 118 aa11.82□□□□□ -0.52
TRAPPC8-201ENST00000283351 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
TRAPPC8-201ENST00000283351 MPZP25189 248 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 Q6ZQT7 251 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 H3BMM0 161 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 C8orf49Q96NF6 230 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 A8MWV9 139 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 FGF16O43320 207 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 SLURP1P55000 103 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 CITED2Q99967 270 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 ESM1Q9NQ30 184 aa11.81□□□□□ -0.52
TRAPPC8-201ENST00000283351 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 ACACBO00763 2458 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 GREB1Q4ZG55 1949 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 TAL2Q16559 108 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 IGFBPL1Q8WX77 278 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 CUL9Q8IWT3 2517 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 SBF2Q86WG5 1849 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 TEX48A0A1B0GUV7 120 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 OTOGLQ3ZCN5 2332 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 H0YIZ8 118 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
TRAPPC8-201ENST00000283351 PTPN13Q12923 2485 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 SHISA9B4DS77 424 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 GFI1Q99684 422 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 TNFRSF6BO95407 300 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 IGHV7-4-1A0A0J9YVY3 117 aa11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-201ENST00000283351 SLAQ13239 276 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 RSPO3Q9BXY4 272 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 ESDP10768 282 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 DIAPH2-AS1Q14236 149 aa11.78□□□□□ -0.52
TRAPPC8-201ENST00000283351 YPEL3P61236 119 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC8-201ENST00000283351 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.52
TRAPPC8-201ENST00000283351 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 LRRK1Q38SD2 2015 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 TRBV6-6A0A0A6YYG2 114 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 GNB1LQ9BYB4 327 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 PROK2Q9HC23 129 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
TRAPPC8-201ENST00000283351 SBF1O95248 1867 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms