RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 F8W735 103 aaPredicted RBP17.34■□□□□ 0.37
CDR2-201ENST00000268383 RBX1P62877 108 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 DYNAPQ8N1N2 210 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 DPM3Q9P2X0 92 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 WI2-2373I1.2A0A1W2PRP0 233 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 SH2D1AO60880 128 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 CT45A10P0DMU9 189 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 WFDC3Q8IUB2 231 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 RNF24Q9Y225 148 aa17.34■□□□□ 0.37
CDR2-201ENST00000268383 IGHV2-70DA0A0C4DH43 119 aa17.33■□□□□ 0.36
CDR2-201ENST00000268383 PIP4P2Q8N4L2 257 aa17.33■□□□□ 0.36
CDR2-201ENST00000268383 SIGLEC8Q9NYZ4 499 aa17.33■□□□□ 0.36
CDR2-201ENST00000268383 RNF151Q2KHN1 245 aa17.33■□□□□ 0.36
CDR2-201ENST00000268383 TMEM189A5PLL7 270 aa17.32■□□□□ 0.36
CDR2-201ENST00000268383 ZNF80P51504 273 aaPredicted RBP17.32■□□□□ 0.36
CDR2-201ENST00000268383 AAMDCQ9H7C9 122 aa17.32■□□□□ 0.36
CDR2-201ENST00000268383 TRBV6-1A0A0K0K1D8 114 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 NPIPB5A8MRT5 1133 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 OR10AG1Q8NH19 301 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 VGLL1Q99990 258 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 VPS13CQ709C8 3753 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 C5orf64Q2M2E5 130 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 ANKRD39Q53RE8 183 aa17.31■□□□□ 0.36
CDR2-201ENST00000268383 PRELID3AQ96N28 172 aa17.3■□□□□ 0.36
CDR2-201ENST00000268383 EGR2P11161 476 aaPredicted RBP17.3■□□□□ 0.36
CDR2-201ENST00000268383 C2orf91Q6ZV80 131 aa17.3■□□□□ 0.36
CDR2-201ENST00000268383 IGLV11-55A0A075B6I3 123 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 GAS8-AS1O95177 125 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 AMMECR1LQ6DCA0 310 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 LYPD1Q8N2G4 141 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 RNF5Q99942 180 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 MSRB1Q9NZV6 116 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 CSN1S1P47710 185 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 MFAP4P55083 255 aa17.29■□□□□ 0.36
CDR2-201ENST00000268383 MRPL51Q4U2R6 128 aaKnown RBP17.29■□□□□ 0.36
CDR2-201ENST00000268383 UQCRFS1P47985 274 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 RHOGP84095 191 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 DEFB125Q8N687 156 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 LY6G5BQ8NDX9 201 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 FAM104BQ5XKR9 115 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 C21orf62Q9NYP8 219 aa17.28■□□□□ 0.36
CDR2-201ENST00000268383 NDUFA3O95167 84 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 GPR183P32249 361 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 ARPC1AQ92747 370 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 FOXC1Q12948 553 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 VKORC1Q9BQB6 163 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 SMAD5-AS1Q9Y6J3 95 aa17.27■□□□□ 0.36
CDR2-201ENST00000268383 CACNG7P62955 275 aa17.27■□□□□ 0.35
CDR2-201ENST00000268383 TWIST1Q15672 202 aa17.27■□□□□ 0.35
CDR2-201ENST00000268383 NPBQ8NG41 125 aa17.27■□□□□ 0.35
CDR2-201ENST00000268383 MAP1AP78559 2803 aaPredicted RBP17.26■□□□□ 0.35
CDR2-201ENST00000268383 IGHV3OR16-13A0A075B7E8 117 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 IGHV3-74A0A0B4J1X5 117 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 IGHV3-66A0A0C4DH42 116 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 NPYP01303 97 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 COX8AP10176 69 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 PPIFP30405 207 aaKnown RBP17.26■□□□□ 0.35
CDR2-201ENST00000268383 ZNF493Q6ZR52 646 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 GATD1Q8NB37 220 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 OR11H6Q8NGC7 330 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 PRR25Q96S07 402 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 SRSF8Q9BRL6 282 aaKnown RBP17.26■□□□□ 0.35
CDR2-201ENST00000268383 NHLH1Q02575 133 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 C12orf54Q6X4T0 127 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 MS4A6AQ9H2W1 248 aa17.26■□□□□ 0.35
CDR2-201ENST00000268383 TRAV8-6A0A0B4J262 113 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 IGHG4P01861 327 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 HIST1H1AQ02539 215 aaPredicted RBP17.25■□□□□ 0.35
CDR2-201ENST00000268383 ERCC8Q13216 396 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 RAB1BQ9H0U4 201 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 COL12A1Q99715 3063 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 ZNF575Q86XF7 245 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 ORMDL3Q8N138 153 aa17.25■□□□□ 0.35
CDR2-201ENST00000268383 NAA38Q9BRA0 125 aaKnown RBP17.25■□□□□ 0.35
CDR2-201ENST00000268383 PSG9Q00887 426 aa17.24■□□□□ 0.35
CDR2-201ENST00000268383 CTSGP08311 255 aa17.24■□□□□ 0.35
CDR2-201ENST00000268383 TRAV30A0A087WSZ9 112 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 CKS2P33552 79 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 C18orf15Q96N68 181 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 PRAC2D3DTV9 90 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 Q6AWC8 147 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 PRSS57Q6UWY2 283 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 ZNF562Q6V9R5 426 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 RNF182Q8N6D2 247 aa17.23■□□□□ 0.35
CDR2-201ENST00000268383 SPTAN1Q13813 2472 aaKnown RBP17.22■□□□□ 0.35
CDR2-201ENST00000268383 CCL21O00585 134 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 ORM1P02763 201 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 PDE6HQ13956 83 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 A0A1B0GW15 77 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 K7EP13 123 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 CEACAM3P40198 252 aa17.22■□□□□ 0.35
CDR2-201ENST00000268383 ODF3BA8MYP8 253 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 FGF6P10767 208 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 VMO1Q7Z5L0 202 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 FER1L6-AS1Q8NA97 138 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 RABAC1Q9UI14 185 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 U3KQK5 164 aa17.21■□□□□ 0.35
CDR2-201ENST00000268383 IGHV3-49A0A0A0MS15 119 aa17.2■□□□□ 0.34
CDR2-201ENST00000268383 NDUFS7O75251 213 aa17.2■□□□□ 0.34
CDR2-201ENST00000268383 GATA1P15976 413 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms