RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ECSCRQ19T08 205 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 S100A7AQ86SG5 101 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 BPESC1Q9GZL8 116 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 AAMDCQ9H7C9 122 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 ZFP30Q9Y2G7 519 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 FAM106CPP0CH98 169 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 MIEN1Q9BRT3 115 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 LPAR2Q9HBW0 351 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 NF1P21359 2839 aa10.07□□□□□ -0.8
CPSF6-201ENST00000266679 IGHV3-35A0A0C4DH35 117 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 M0R143 59 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 SAA4P35542 130 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 UBE2E1P51965 193 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 AJUBAQ96IF1 538 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 SH2D7A6NKC9 451 aaPredicted RBP10.06□□□□□ -0.8
CPSF6-201ENST00000266679 APOHP02749 345 aaPredicted RBP10.06□□□□□ -0.8
CPSF6-201ENST00000266679 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 SPATA45Q537H7 98 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 LCN12Q6JVE5 192 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 ATOH7Q8N100 152 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 TMEM190Q8WZ59 177 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 RABAC1Q9UI14 185 aa10.06□□□□□ -0.8
CPSF6-201ENST00000266679 IGKV2-40A0A087WW87 121 aaPredicted RBP10.05□□□□□ -0.8
CPSF6-201ENST00000266679 HAX1O00165 279 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 IGKV2D-40P01614 121 aaPredicted RBP10.05□□□□□ -0.8
CPSF6-201ENST00000266679 CTSGP08311 255 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 RAB4AP20338 218 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 CRIP1P50238 77 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 LMO4P61968 165 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 PDE6HQ13956 83 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 TPPP3Q9BW30 176 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 CLEC5AQ9NY25 188 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 C2CD3Q4AC94 2353 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 ACANP16112 2415 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
CPSF6-201ENST00000266679 ATP6V0E1O15342 81 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 SCGB2A1O75556 95 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 GPR183P32249 361 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 CSN1S1P47710 185 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 EBLN2Q6P2I7 272 aa10.05□□□□□ -0.8
CPSF6-201ENST00000266679 FAM110DQ8TAY7 271 aaPredicted RBP10.05□□□□□ -0.8
CPSF6-201ENST00000266679 FLNAP21333 2647 aaKnown RBP10.04□□□□□ -0.8
CPSF6-201ENST00000266679 OVOL3O00110 214 aa10.04□□□□□ -0.8
CPSF6-201ENST00000266679 RPL7P18124 248 aaKnown RBP10.04□□□□□ -0.8
CPSF6-201ENST00000266679 PSG9Q00887 426 aa10.04□□□□□ -0.8
CPSF6-201ENST00000266679 IGFL4Q6B9Z1 124 aa10.04□□□□□ -0.8
CPSF6-201ENST00000266679 A0A1B0GUT8 65 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 CTRLP40313 264 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
CPSF6-201ENST00000266679 C15orf32Q32M92 178 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 TMSB15BA0A087X1C1 80 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 NPFFO15130 113 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 HLA-DMBP28068 263 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 NUTF2P61970 127 aaKnown RBP10.03□□□□□ -0.8
CPSF6-201ENST00000266679 RIGQ13278 110 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
CPSF6-201ENST00000266679 IGHV3OR16-10A0A075B7F0 116 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.02□□□□□ -0.81
CPSF6-201ENST00000266679 RHOGP84095 191 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 FAM162BQ5T6X4 162 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 ZNF502Q8TBZ5 544 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 TXN2Q99757 166 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 LINC01548A6NM66 108 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 SH2D1AO60880 128 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
CPSF6-201ENST00000266679 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 SPATA12Q7Z6I5 190 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 Q8TAT8 98 aa10.02□□□□□ -0.81
CPSF6-201ENST00000266679 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.81
CPSF6-201ENST00000266679 C2orf70A6NJV1 201 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 G3V318 75 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 ZNF138P52744 262 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 SSTP61278 116 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 RELQ04864 619 aaPredicted RBP10.01□□□□□ -0.81
CPSF6-201ENST00000266679 NDFIP1Q9BT67 221 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV4-39P01824 125 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 BATFQ16520 125 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 LINC00173Q6ZV60 143 aa10.01□□□□□ -0.81
CPSF6-201ENST00000266679 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV3-66A0A0C4DH42 116 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 CLEC3BP05452 202 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 CSN3P07498 182 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 TMEM219Q86XT9 240 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 VGLL1Q99990 258 aa10□□□□□ -0.81
CPSF6-201ENST00000266679 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms