RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.77□□□□□ -0.85
CHMP3-201ENST00000263856 NPIPB6E9PJ23 425 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 SH2D1AO60880 128 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 EVI2AP22794 236 aa9.77□□□□□ -0.85
CHMP3-201ENST00000263856 GAGE12BA1L429 117 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 GAGE10A6NGK3 116 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 ATRXP46100 2492 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 RBPJQ06330 500 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 TMEM97Q5BJF2 176 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 SPTAN1Q13813 2472 aaKnown RBP9.76□□□□□ -0.85
CHMP3-201ENST00000263856 IGLV1-47P01700 117 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 COX8AP10176 69 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 RABAC1Q9UI14 185 aa9.76□□□□□ -0.85
CHMP3-201ENST00000263856 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 SHISA9B4DS77 424 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 OCIAD2Q56VL3 154 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 ZNF414Q96IQ9 312 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 ZNF292O60281 2723 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 H3BRN7 92 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 CD3EP07766 207 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 PLP1P60201 277 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 IGFL3Q6UXB1 125 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 ORMDL3Q8N138 153 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 MSRB1Q9NZV6 116 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
CHMP3-201ENST00000263856 SAP30O75446 220 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 CRYGBP07316 175 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 RIPPLY3P57055 190 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 C2orf91Q6ZV80 131 aa9.75□□□□□ -0.85
CHMP3-201ENST00000263856 K7EP13 123 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 CD5LO43866 347 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 NPYP01303 97 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
CHMP3-201ENST00000263856 CDKN1BP46527 198 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 MRPL51Q4U2R6 128 aaKnown RBP9.74□□□□□ -0.85
CHMP3-201ENST00000263856 PCP2Q8IVA1 136 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 TMEM14CQ9P0S9 112 aa9.74□□□□□ -0.85
CHMP3-201ENST00000263856 K7EMI3 77 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 NBR2O15453 112 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 APOBEC3AP31941 199 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-201ENST00000263856 SAPCD1Q5SSQ6 148 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 VGLL1Q99990 258 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
CHMP3-201ENST00000263856 J3KRW8 73 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 TNFRSF13BO14836 293 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-201ENST00000263856 C1RLQ9NZP8 487 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 GAS8-AS1O95177 125 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 PRSS1P07477 247 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 EGR2P11161 476 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-201ENST00000263856 ERCC8Q13216 396 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 KAAG1Q9UBP8 84 aa9.73□□□□□ -0.85
CHMP3-201ENST00000263856 A0A096LNJ9 63 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 A1L4Q6 167 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 GCSHP23434 173 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 FAM104BQ5XKR9 115 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 C8orf31Q8N9H6 132 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 MEGF9Q9H1U4 602 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
CHMP3-201ENST00000263856 HBDP02042 147 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 GATA1P15976 413 aaPredicted RBP9.72□□□□□ -0.85
CHMP3-201ENST00000263856 ZNF80P51504 273 aaPredicted RBP9.72□□□□□ -0.85
CHMP3-201ENST00000263856 MFAP4P55083 255 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 FER1L6-AS1Q8NA97 138 aa9.72□□□□□ -0.85
CHMP3-201ENST00000263856 KIR3DS1Q14943 382 aa9.71□□□□□ -0.85
CHMP3-201ENST00000263856 ECSCRQ19T08 205 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 ZNF672Q499Z4 452 aaPredicted RBP9.71□□□□□ -0.86
CHMP3-201ENST00000263856 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 PTPRQQ9UMZ3 2332 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 TNFRSF14Q92956 283 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 DPM3Q9P2X0 92 aa9.71□□□□□ -0.86
CHMP3-201ENST00000263856 A6NDN8 102 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 UFC1Q9Y3C8 167 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 B9A039 149 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 NDPQ00604 133 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
CHMP3-201ENST00000263856 K7ERU9 68 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 LEPP41159 167 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 ARPC1AQ92747 370 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 PRR25Q96S07 402 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 OVOL3O00110 214 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 Q6AWC8 147 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 MUC6Q6W4X9 2439 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 IGF2RP11717 2491 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 A0A0G2JLM5 398 aa9.69□□□□□ -0.86
CHMP3-201ENST00000263856 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
CHMP3-201ENST00000263856 HOXB4P17483 251 aaPredicted RBP9.68□□□□□ -0.86
CHMP3-201ENST00000263856 FCER1GP30273 86 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 GTF2H5Q6ZYL4 71 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 Q8NA96 180 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 FOXC2Q99958 501 aa9.68□□□□□ -0.86
CHMP3-201ENST00000263856 C5orf64Q2M2E5 130 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms