RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 NAT8BQ9UHF3 227 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
SSB-201ENST00000260956 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
SSB-201ENST00000260956 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
SSB-201ENST00000260956 J3QLI3 93 aa13.66□□□□□ -0.22
SSB-201ENST00000260956 RPL19P84098 196 aaKnown RBP13.66□□□□□ -0.22
SSB-201ENST00000260956 GNB4Q9HAV0 340 aa13.66□□□□□ -0.22
SSB-201ENST00000260956 SMAD5-AS1Q9Y6J3 95 aa13.66□□□□□ -0.22
SSB-201ENST00000260956 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 HIGD1CA8MV81 97 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 DIRC3C9JPN6 131 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 SERF1AO75920 110 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 IGHV4-38-2P0DP08 117 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 RAB4BP61018 213 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 SLAQ13239 276 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 ATP5L2Q7Z4Y8 100 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 S100A7AQ86SG5 101 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 ARL6IP6Q8N6S5 226 aa13.65□□□□□ -0.22
SSB-201ENST00000260956 CLPSL1A2RUU4 121 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 M0R3E3 92 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 ZNF253O75346 499 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 IGHG4P01861 327 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 BRD3OSQ6XYD6 125 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 CMTM2Q8TAZ6 248 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 ZC2HC1AQ96GY0 325 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 GFRA4Q9GZZ7 299 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 SRD5A1P18405 259 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 PSG3Q16557 428 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 COX8CQ7Z4L0 72 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
SSB-201ENST00000260956 FAM231BA6NCW3 169 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 APOHP02749 345 aaPredicted RBP13.63□□□□□ -0.23
SSB-201ENST00000260956 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
SSB-201ENST00000260956 GPR183P32249 361 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 OR10J3Q5JRS4 329 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 TOMM20LQ6UXN7 152 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 OR4B1Q8NGF8 309 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 PSG8Q9UQ74 426 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 ZFP30Q9Y2G7 519 aa13.63□□□□□ -0.23
SSB-201ENST00000260956 P01737 135 aa13.62□□□□□ -0.23
SSB-201ENST00000260956 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
SSB-201ENST00000260956 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
SSB-201ENST00000260956 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
SSB-201ENST00000260956 RABAC1Q9UI14 185 aa13.62□□□□□ -0.23
SSB-201ENST00000260956 A0A087X0K7 114 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 A6NDX4 124 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 A8MWL6 223 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 SCGB2A1O75556 95 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 CRIP1P50238 77 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 KIAA1644Q3SXP7 199 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 BRI3O95415 125 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
SSB-201ENST00000260956 SRSF2Q01130 221 aaKnown RBP13.61□□□□□ -0.23
SSB-201ENST00000260956 Q6ZWC4 215 aa13.61□□□□□ -0.23
SSB-201ENST00000260956 NOL4LQ96MY1 436 aaPredicted RBP13.61□□□□□ -0.23
SSB-201ENST00000260956 ZNF331Q9NQX6 463 aaPredicted RBP13.61□□□□□ -0.23
SSB-201ENST00000260956 SERTM2A0A1B0GWG4 89 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 APCSP02743 223 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 IGF1P05019 195 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 RCHY1Q96PM5 261 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 U3KQE9 123 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 COL6A5A8TX70 2615 aa13.6□□□□□ -0.23
SSB-201ENST00000260956 TRAV41A0A0B4J266 112 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 BUB3O43684 328 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 CLEC3BP05452 202 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 SRIP30626 198 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 PAFAH1B2P68402 229 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 PSG9Q00887 426 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 KLF5Q13887 457 aaPredicted RBP13.59□□□□□ -0.23
SSB-201ENST00000260956 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 RBPMS2Q6ZRY4 209 aaKnown RBP13.59□□□□□ -0.23
SSB-201ENST00000260956 C18orf32Q8TCD1 76 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 EEF1AKMT3Q96AZ1 226 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 ASCL2Q99929 193 aa13.59□□□□□ -0.23
SSB-201ENST00000260956 GATD1Q8NB37 220 aa13.58□□□□□ -0.24
SSB-201ENST00000260956 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
SSB-201ENST00000260956 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
SSB-201ENST00000260956 IGHV3-35A0A0C4DH35 117 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 FAM223BA6NKX1 122 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 K7EQM0 130 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 IGHG2P01859 326 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
SSB-201ENST00000260956 PPIFP30405 207 aaKnown RBP13.57□□□□□ -0.24
SSB-201ENST00000260956 TPPP2P59282 170 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 HBBP68871 147 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 CLEC19AQ6UXS0 136 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 BAGE3Q86Y29 109 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 FAM223AQ8IWN6 122 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 MS4A10Q96PG2 267 aa13.57□□□□□ -0.24
SSB-201ENST00000260956 ALKBH7Q9BT30 221 aaPredicted RBP13.57□□□□□ -0.24
SSB-201ENST00000260956 IGHV3OR16-8A0A075B7F1 116 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 RIPPLY3P57055 190 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 PKIAP61925 76 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 C8orf49Q96NF6 230 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 IGKV2-40A0A087WW87 121 aaPredicted RBP13.56□□□□□ -0.24
SSB-201ENST00000260956 A8MWP6 167 aa13.56□□□□□ -0.24
SSB-201ENST00000260956 CHEK1O14757 476 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms