RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ZFHX4Q86UP3 3567 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 TMSB15BA0A087X1C1 80 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 LAMTOR5O43504 91 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 ATP5LO75964 103 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 PRSS1P07477 247 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 TWIST1Q15672 202 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
TROAP-201ENST00000257909 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 SPAG8Q99932 426 aaPredicted RBP9.06□□□□□ -0.96
TROAP-201ENST00000257909 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
TROAP-201ENST00000257909 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
TROAP-201ENST00000257909 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 I3L2K1 104 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 CEACAM4O75871 244 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 DPM2O94777 84 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 CRYGBP07316 175 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 LEPP41159 167 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 RAB9AP51151 201 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 CRYBA4P53673 196 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 CKS1BP61024 79 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 PDE6HQ13956 83 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 IGKV1-17P01599 117 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 ZNF883P0CG24 379 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 SIGLEC9Q9Y336 463 aa9.05□□□□□ -0.96
TROAP-201ENST00000257909 NPIPB5A8MRT5 1133 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 MRPS12O15235 138 aaKnown RBP9.04□□□□□ -0.96
TROAP-201ENST00000257909 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 NCOR1O75376 2440 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 H3BMG7 143 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 M0R3E3 92 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 SRSF6Q13247 344 aaKnown RBP9.04□□□□□ -0.96
TROAP-201ENST00000257909 C5orf64Q2M2E5 130 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
TROAP-201ENST00000257909 IGHV3-72A0A0B4J1Y9 119 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
TROAP-201ENST00000257909 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 GTSCR1Q86UQ5 136 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 PPP1R27Q86WC6 154 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 MRAP2Q96G30 205 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 ICE1Q9Y2F5 2266 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 NDUFB3O43676 98 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 ZNF491Q8N8L2 437 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 RNF125Q96EQ8 232 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 FOXC2Q99958 501 aa9.03□□□□□ -0.96
TROAP-201ENST00000257909 MBD3L4A6NDZ8 208 aaPredicted RBP9.02□□□□□ -0.96
TROAP-201ENST00000257909 MBD3L3A6NE82 208 aaPredicted RBP9.02□□□□□ -0.96
TROAP-201ENST00000257909 MBD3L5A6NJ08 208 aaPredicted RBP9.02□□□□□ -0.96
TROAP-201ENST00000257909 CCL8P80075 99 aa9.02□□□□□ -0.96
TROAP-201ENST00000257909 SRSF2Q01130 221 aaKnown RBP9.02□□□□□ -0.96
TROAP-201ENST00000257909 TTC9CQ8N5M4 171 aa9.02□□□□□ -0.96
TROAP-201ENST00000257909 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.96
TROAP-201ENST00000257909 RNF185Q96GF1 192 aa9.02□□□□□ -0.96
TROAP-201ENST00000257909 CFAP47Q6ZTR5 3102 aa9.02□□□□□ -0.97
TROAP-201ENST00000257909 TMEM8BA6NDV4 472 aa9.02□□□□□ -0.97
TROAP-201ENST00000257909 FCN3O75636 299 aa9.02□□□□□ -0.97
TROAP-201ENST00000257909 EGR2P11161 476 aaPredicted RBP9.02□□□□□ -0.97
TROAP-201ENST00000257909 CNTFRP26992 372 aa9.02□□□□□ -0.97
TROAP-201ENST00000257909 C1orf210Q8IVY1 113 aa9.02□□□□□ -0.97
TROAP-201ENST00000257909 SRSF8Q9BRL6 282 aaKnown RBP9.02□□□□□ -0.97
TROAP-201ENST00000257909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.01□□□□□ -0.97
TROAP-201ENST00000257909 TNFRSF6BO95407 300 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 SVILO95425 2214 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 IL4P05112 153 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 ZNF474Q6S9Z5 364 aaPredicted RBP9.01□□□□□ -0.97
TROAP-201ENST00000257909 ASCL5Q7RTU5 278 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 PRR25Q96S07 402 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 PRO0461Q9UI25 63 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 TRAV17A0A0B4J275 112 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 DLX6P56179 175 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 SEM1Q6ZVN7 128 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 ARRDC1-AS1Q9H2J1 176 aa9.01□□□□□ -0.97
TROAP-201ENST00000257909 Q6ZS92 163 aa9□□□□□ -0.97
TROAP-201ENST00000257909 TMEM158Q8WZ71 300 aa9□□□□□ -0.97
TROAP-201ENST00000257909 HIST1H4GQ99525 98 aa9□□□□□ -0.97
TROAP-201ENST00000257909 TMEM160Q9NX00 188 aa9□□□□□ -0.97
TROAP-201ENST00000257909 MRPL16Q9NX20 251 aaKnown RBP9□□□□□ -0.97
TROAP-201ENST00000257909 ABCA1O95477 2261 aa9□□□□□ -0.97
TROAP-201ENST00000257909 LINC01619G3V211 115 aa9□□□□□ -0.97
TROAP-201ENST00000257909 C16orf97H3BN30 126 aa9□□□□□ -0.97
TROAP-201ENST00000257909 K7EIM0 57 aa9□□□□□ -0.97
TROAP-201ENST00000257909 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
TROAP-201ENST00000257909 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
TROAP-201ENST00000257909 Q8N8P6 123 aa9□□□□□ -0.97
TROAP-201ENST00000257909 NUP37Q8NFH4 326 aa9□□□□□ -0.97
TROAP-201ENST00000257909 TRAV40A0A0B4J280 105 aa8.99□□□□□ -0.97
TROAP-201ENST00000257909 C17orf100A8MU93 164 aa8.99□□□□□ -0.97
TROAP-201ENST00000257909 AMTNQ6UX39 209 aa8.99□□□□□ -0.97
TROAP-201ENST00000257909 ATP6V0E2Q8NHE4 81 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms