RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 EEF1AKMT3Q96AZ1 226 aa16.77■□□□□ 0.28
CLN6-201ENST00000249806 TRAV41A0A0B4J266 112 aa16.77■□□□□ 0.27
CLN6-201ENST00000249806 APOHP02749 345 aaPredicted RBP16.77■□□□□ 0.27
CLN6-201ENST00000249806 FAM208BQ5VWN6 2430 aa16.77■□□□□ 0.27
CLN6-201ENST00000249806 FOXA3P55318 350 aaPredicted RBP16.76■□□□□ 0.27
CLN6-201ENST00000249806 KLF5Q13887 457 aaPredicted RBP16.76■□□□□ 0.27
CLN6-201ENST00000249806 CSPG4Q6UVK1 2322 aa16.76■□□□□ 0.27
CLN6-201ENST00000249806 MSMBP08118 114 aa16.76■□□□□ 0.27
CLN6-201ENST00000249806 NTF3P20783 257 aa16.76■□□□□ 0.27
CLN6-201ENST00000249806 KRTDAPP60985 99 aa16.76■□□□□ 0.27
CLN6-201ENST00000249806 VGLL1Q99990 258 aa16.76■□□□□ 0.27
CLN6-201ENST00000249806 IGHV3-49A0A0A0MS15 119 aa16.75■□□□□ 0.27
CLN6-201ENST00000249806 TRBV7-1A0A0A6YYK4 115 aa16.75■□□□□ 0.27
CLN6-201ENST00000249806 ZNF207O43670 478 aaKnown RBP16.75■□□□□ 0.27
CLN6-201ENST00000249806 C19orf54Q5BKX5 351 aa16.75■□□□□ 0.27
CLN6-201ENST00000249806 SPOCK3Q9BQ16 436 aa16.75■□□□□ 0.27
CLN6-201ENST00000249806 CT45A10P0DMU9 189 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 RELQ04864 619 aaPredicted RBP16.74■□□□□ 0.27
CLN6-201ENST00000249806 ATP5G2Q06055 141 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 NIT1Q86X76 327 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 Q8TAT8 98 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 HAX1O00165 279 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 ARMS2P0C7Q2 107 aa16.74■□□□□ 0.27
CLN6-201ENST00000249806 SERTM2A0A1B0GWG4 89 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 H3BUX3 64 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 AVPP01185 164 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 REC114Q7Z4M0 266 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 BBC3Q96PG8 261 aaPredicted RBP16.73■□□□□ 0.27
CLN6-201ENST00000249806 TPPP3Q9BW30 176 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 HIF1ANQ9NWT6 349 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 POLQO75417 2590 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 C1orf194Q5T5A4 169 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 LCN12Q6JVE5 192 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 PRR25Q96S07 402 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 FBN2P35556 2912 aa16.73■□□□□ 0.27
CLN6-201ENST00000249806 LRRK2Q5S007 2527 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 TMSB15BA0A087X1C1 80 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 A0A1B0GUT8 65 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 S100A7P31151 101 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 RNF182Q8N6D2 247 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 USP9YO00507 2555 aaPredicted RBP16.72■□□□□ 0.27
CLN6-201ENST00000249806 TRGV3P03979 118 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 RNASEKQ6P5S7 137 aaKnown RBP16.72■□□□□ 0.27
CLN6-201ENST00000249806 URB1-AS1Q96HZ7 61 aa16.72■□□□□ 0.27
CLN6-201ENST00000249806 M0QZ24 198 aa16.71■□□□□ 0.27
CLN6-201ENST00000249806 SH2D1AO60880 128 aa16.71■□□□□ 0.27
CLN6-201ENST00000249806 HSBP1O75506 76 aa16.71■□□□□ 0.27
CLN6-201ENST00000249806 Q8N976 141 aa16.71■□□□□ 0.27
CLN6-201ENST00000249806 PRAC2D3DTV9 90 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 SSTP61278 116 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 TEX43Q6ZNM6 134 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 ANKRD17O75179 2603 aaKnown RBP16.7■□□□□ 0.26
CLN6-201ENST00000249806 LOC102724200A0A096LPH7 203 aaPredicted RBP16.7■□□□□ 0.26
CLN6-201ENST00000249806 RAB9AP51151 201 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 ZNF80P51504 273 aaPredicted RBP16.7■□□□□ 0.26
CLN6-201ENST00000249806 CRIP2P52943 208 aaPredicted RBP16.7■□□□□ 0.26
CLN6-201ENST00000249806 BLCAPP62952 87 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 SAPCD1Q5SSQ6 148 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 Q6ZS46 218 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 ARL6IP6Q8N6S5 226 aa16.7■□□□□ 0.26
CLN6-201ENST00000249806 ERCC8Q13216 396 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 FAM162BQ5T6X4 162 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 A0A087X0K7 114 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 A6NDX4 124 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 B4DSR2 109 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 C3orf79P0CE67 100 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 METTL26Q96S19 204 aa16.69■□□□□ 0.26
CLN6-201ENST00000249806 ZANQ9Y493 2812 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 KIR2DL5BA0A0G2JN68 375 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 KIR2DL5BA0A0G2JPC4 375 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 TMEM189A5PLL7 270 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 TRBV12-3P01733 135 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 IGF1P05019 195 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 KIR2DL5AQ8N109 375 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 NDUFAF3Q9BU61 184 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 FAM223BA6NKX1 122 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 COX8CQ7Z4L0 72 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 FAM223AQ8IWN6 122 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 PAM16Q9Y3D7 125 aa16.68■□□□□ 0.26
CLN6-201ENST00000249806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.67■□□□□ 0.26
CLN6-201ENST00000249806 M0R2Z0 102 aa16.67■□□□□ 0.26
CLN6-201ENST00000249806 RIGQ13278 110 aa16.67■□□□□ 0.26
CLN6-201ENST00000249806 BORCS7Q96B45 105 aa16.67■□□□□ 0.26
CLN6-201ENST00000249806 NDFIP1Q9BT67 221 aa16.67■□□□□ 0.26
CLN6-201ENST00000249806 IGHG2P01859 326 aa16.66■□□□□ 0.26
CLN6-201ENST00000249806 LYZL1Q6UWQ5 148 aa16.66■□□□□ 0.26
CLN6-201ENST00000249806 PPIFP30405 207 aaKnown RBP16.66■□□□□ 0.26
CLN6-201ENST00000249806 PMCHL1Q16048 86 aa16.66■□□□□ 0.26
CLN6-201ENST00000249806 MUC21A0A0G2JKD1 596 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 MUC21A0A140T8X8 626 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 ARL3P36405 182 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 MUC21Q5SSG8 566 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 KLK15Q9H2R5 256 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 U3KQE9 123 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 A1L4Q6 167 aa16.65■□□□□ 0.26
CLN6-201ENST00000249806 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN6-201ENST00000249806 TRAV8-2A0A0B4J237 113 aa16.64■□□□□ 0.25
CLN6-201ENST00000249806 FBLL1A6NHQ2 334 aaKnown RBP16.64■□□□□ 0.25
CLN6-201ENST00000249806 ZNF138P52744 262 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms