RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 CT45A10P0DMU9 189 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 TPPP2P59282 170 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 HBBP68871 147 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 DEFB113Q30KQ7 82 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 GTSF1Q8WW33 167 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 ZNF785A8K8V0 405 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 CHEK1O14757 476 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 OR2D3Q8NGH3 330 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 NOL4LQ96MY1 436 aaPredicted RBP17.65■□□□□ 0.42
HOXD9-201ENST00000249499 LINC00527Q9UJ94 153 aa17.65■□□□□ 0.42
HOXD9-201ENST00000249499 POLQO75417 2590 aa17.64■□□□□ 0.41
HOXD9-201ENST00000249499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.64■□□□□ 0.41
HOXD9-201ENST00000249499 ARL3P36405 182 aa17.64■□□□□ 0.41
HOXD9-201ENST00000249499 TCF24Q7RTU0 167 aa17.64■□□□□ 0.41
HOXD9-201ENST00000249499 BAGE3Q86Y29 109 aa17.64■□□□□ 0.41
HOXD9-201ENST00000249499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.64■□□□□ 0.41
HOXD9-201ENST00000249499 CYSRT1A8MQ03 144 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 NDUFA4O00483 81 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 TGFAP01135 160 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 IGLV1-40P01703 118 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 Q6AWC8 147 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 MRPL53Q96EL3 112 aaKnown RBP17.63■□□□□ 0.41
HOXD9-201ENST00000249499 A0A0G2JLM5 398 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 RBAKDNA6NC62 111 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 IGHG4P01861 327 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 BLCAPP62952 87 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 CLEC5AQ9NY25 188 aa17.63■□□□□ 0.41
HOXD9-201ENST00000249499 ANKRD17O75179 2603 aaKnown RBP17.62■□□□□ 0.41
HOXD9-201ENST00000249499 IGHV3OR16-8A0A075B7F1 116 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 FSHBP01225 129 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 CFHR3Q02985 330 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 SLAQ13239 276 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 FAM209BQ5JX69 171 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 C9orf139Q6ZV77 190 aa17.62■□□□□ 0.41
HOXD9-201ENST00000249499 A0A1B0GUS0 222 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 A8MWP6 167 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 NUPR1O60356 82 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 SERF1AO75920 110 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 GZMBP10144 247 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 LINC00310P59036 64 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 DEFB112Q30KQ8 113 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 GDF5OSQ5U4N7 250 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 LCN12Q6JVE5 192 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 SRIP30626 198 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 CDPF1Q6NVV7 123 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 PRR25Q96S07 402 aa17.61■□□□□ 0.41
HOXD9-201ENST00000249499 NOTCH2Q04721 2471 aa17.6■□□□□ 0.41
HOXD9-201ENST00000249499 HAX1O00165 279 aa17.6■□□□□ 0.41
HOXD9-201ENST00000249499 IGHV4-31P0DP07 118 aa17.6■□□□□ 0.41
HOXD9-201ENST00000249499 CRIP1P50238 77 aa17.6■□□□□ 0.41
HOXD9-201ENST00000249499 IGKV2-40A0A087WW87 121 aaPredicted RBP17.59■□□□□ 0.41
HOXD9-201ENST00000249499 A0A1B0GW15 77 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 RNF223E7ERA6 249 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 IGKV2D-40P01614 121 aaPredicted RBP17.59■□□□□ 0.41
HOXD9-201ENST00000249499 KRTAP10-9P60411 292 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 KLF5Q13887 457 aaPredicted RBP17.59■□□□□ 0.41
HOXD9-201ENST00000249499 KIAA1644Q3SXP7 199 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 PRSS57Q6UWY2 283 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 PGLYRP4Q96LB8 373 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 PRDM13Q9H4Q3 707 aa17.59■□□□□ 0.41
HOXD9-201ENST00000249499 TMEM89A2RUT3 159 aa17.58■□□□□ 0.41
HOXD9-201ENST00000249499 CAMPP49913 170 aa17.58■□□□□ 0.41
HOXD9-201ENST00000249499 FAM162BQ5T6X4 162 aa17.58■□□□□ 0.41
HOXD9-201ENST00000249499 NDFIP1Q9BT67 221 aa17.58■□□□□ 0.41
HOXD9-201ENST00000249499 PF4V1P10720 104 aa17.58■□□□□ 0.4
HOXD9-201ENST00000249499 IQCJQ1A5X6 159 aa17.58■□□□□ 0.4
HOXD9-201ENST00000249499 Q5PR19 223 aa17.58■□□□□ 0.4
HOXD9-201ENST00000249499 Q71RC1 249 aaPredicted RBP17.58■□□□□ 0.4
HOXD9-201ENST00000249499 C8orf49Q96NF6 230 aa17.58■□□□□ 0.4
HOXD9-201ENST00000249499 PDZD2O15018 2839 aa17.57■□□□□ 0.4
HOXD9-201ENST00000249499 APOHP02749 345 aaPredicted RBP17.57■□□□□ 0.4
HOXD9-201ENST00000249499 BMI1P35226 326 aa17.57■□□□□ 0.4
HOXD9-201ENST00000249499 GLMPQ8WWB7 406 aa17.57■□□□□ 0.4
HOXD9-201ENST00000249499 LINC00587B1AMM8 73 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 IGHV4-59P01825 116 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 SRSF2Q01130 221 aaKnown RBP17.56■□□□□ 0.4
HOXD9-201ENST00000249499 Q6ZS46 218 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 GATD1Q8NB37 220 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 KCNS1Q96KK3 526 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 A0A1B0GUT8 65 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 RIGQ13278 110 aa17.56■□□□□ 0.4
HOXD9-201ENST00000249499 RPS20P60866 119 aaKnown RBP17.55■□□□□ 0.4
HOXD9-201ENST00000249499 C18orf32Q8TCD1 76 aa17.55■□□□□ 0.4
HOXD9-201ENST00000249499 VGLL1Q99990 258 aa17.55■□□□□ 0.4
HOXD9-201ENST00000249499 ALKBH7Q9BT30 221 aaPredicted RBP17.55■□□□□ 0.4
HOXD9-201ENST00000249499 KLK15Q9H2R5 256 aa17.55■□□□□ 0.4
HOXD9-201ENST00000249499 A0A1W2PS18 150 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 SH2D1AO60880 128 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 HLA-DMBP28068 263 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 PKIAP61925 76 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 C8orf86Q6ZUL3 223 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 OR4X2Q8NGF9 303 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 SAMD10Q9BYL1 202 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 F2Z2F3 143 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 TSTD3H0UI37 97 aa17.54■□□□□ 0.4
HOXD9-201ENST00000249499 IGHV3-66A0A0C4DH42 116 aa17.53■□□□□ 0.4
HOXD9-201ENST00000249499 TMEM189A5PLL7 270 aa17.53■□□□□ 0.4
HOXD9-201ENST00000249499 ZNF705FA8MVS1 300 aaPredicted RBP17.53■□□□□ 0.4
HOXD9-201ENST00000249499 TRBV12-3P01733 135 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms