RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CENPVL3A0A0U1RRI6 287 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 NPFFO15130 113 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 CLEC3BP05452 202 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGLC3P0DOY3 106 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 KLK9Q2XQG4 91 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 LINC00173Q6ZV60 143 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 MRPL52Q86TS9 123 aaKnown RBP15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 GATD1Q8NB37 220 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 KLK9Q9UKQ9 250 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 ABCA2Q9BZC7 2435 aa15.16■□□□□ 0.02
CDC42EP1-201ENST00000249014 SH2D1AO60880 128 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 Q8TAT8 98 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 PRR25Q96S07 402 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 ZFAND3Q9H8U3 227 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 TMSB15BA0A087X1C1 80 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 IGHV4-39P01824 125 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 RELQ04864 619 aaPredicted RBP15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 CCDC140Q96MF4 163 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 VGLL1Q99990 258 aa15.15■□□□□ 0.02
CDC42EP1-201ENST00000249014 CELSR1Q9NYQ6 3014 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 M0QZK8 103 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 COX8CQ7Z4L0 72 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 TCAPO15273 167 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 Q6AWC8 147 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 TMEM70Q9BUB7 260 aa15.14■□□□□ 0.01
CDC42EP1-201ENST00000249014 TMEM189A5PLL7 270 aa15.13■□□□□ 0.01
CDC42EP1-201ENST00000249014 LYZL1Q6UWQ5 148 aa15.13■□□□□ 0.01
CDC42EP1-201ENST00000249014 ARL6IP6Q8N6S5 226 aa15.13■□□□□ 0.01
CDC42EP1-201ENST00000249014 UQCR10Q9UDW1 63 aa15.13■□□□□ 0.01
CDC42EP1-201ENST00000249014 CSN3P07498 182 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 ZNF80P51504 273 aaPredicted RBP15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 CLEC19AQ6UXS0 136 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 C5orf56Q8N8D9 126 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 IGHV3OR16-10A0A075B7F0 116 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 A0A1B0GW15 77 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 BUB3O43684 328 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 SAPCD1Q5SSQ6 148 aa15.12■□□□□ 0.01
CDC42EP1-201ENST00000249014 CLPSL1A2RUU4 121 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 CRXO43186 299 aaPredicted RBP15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 LEPROTL1O95214 131 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 TMEM219Q86XT9 240 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 TRAV9-2A0A087WT02 112 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 IGHV3-66A0A0C4DH42 116 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 TMEM213A2RRL7 107 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 ZNF493Q6ZR52 646 aa15.11■□□□□ 0.01
CDC42EP1-201ENST00000249014 BATFQ16520 125 aa15.1■□□□□ 0.01
CDC42EP1-201ENST00000249014 Q6ZN92 141 aa15.1■□□□□ 0.01
CDC42EP1-201ENST00000249014 KLHDC1Q8N7A1 406 aa15.1■□□□□ 0.01
CDC42EP1-201ENST00000249014 MUC21A0A0G2JKD1 596 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 MUC21A0A140T8X8 626 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 SYS1-DBNDD2H3BUS1 97 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 IGLL1P15814 213 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 MUC21Q5SSG8 566 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 ZNF575Q86XF7 245 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 PRAC2D3DTV9 90 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 RPLP1P05386 114 aaKnown RBP15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 PAX8Q06710 450 aa15.09■□□□□ 0.01
CDC42EP1-201ENST00000249014 IGHV3OR16-13A0A075B7E8 117 aa15.08■□□□□ 0.01
CDC42EP1-201ENST00000249014 IGHV3-74A0A0B4J1X5 117 aa15.08■□□□□ 0.01
CDC42EP1-201ENST00000249014 FBLL1A6NHQ2 334 aaKnown RBP15.08■□□□□ 0.01
CDC42EP1-201ENST00000249014 GOSR1O95249 250 aa15.08■□□□□ 0.01
CDC42EP1-201ENST00000249014 RNF182Q8N6D2 247 aa15.08■□□□□ 0.01
CDC42EP1-201ENST00000249014 A0A087X0K7 114 aa15.08■□□□□ 0
CDC42EP1-201ENST00000249014 FOSL1P15407 271 aa15.08■□□□□ 0
CDC42EP1-201ENST00000249014 S100A7P31151 101 aa15.08■□□□□ 0
CDC42EP1-201ENST00000249014 ERCC8Q13216 396 aa15.08■□□□□ 0
CDC42EP1-201ENST00000249014 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.08■□□□□ 0
CDC42EP1-201ENST00000249014 PKD1L2Q7Z442 2459 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 OR4C46A6NHA9 309 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 BRD3OSQ6XYD6 125 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 PIFOQ8TCI5 191 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 EEF1AKMT3Q96AZ1 226 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 COL12A1Q99715 3063 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 IGHV4-61A0A0C4DH41 118 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 HNRNPA3P51991 378 aaKnown RBP15.07■□□□□ 0
CDC42EP1-201ENST00000249014 DMRTA1Q5VZB9 504 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 AMN1Q8IY45 258 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 LINC00527Q9UJ94 153 aa15.07■□□□□ 0
CDC42EP1-201ENST00000249014 SPTAN1Q13813 2472 aaKnown RBP15.06■□□□□ 0
CDC42EP1-201ENST00000249014 IGHV3-49A0A0A0MS15 119 aa15.06■□□□□ 0
CDC42EP1-201ENST00000249014 OR5AL1P0C617 328 aa15.06■□□□□ 0
CDC42EP1-201ENST00000249014 RAB9AP51151 201 aa15.06■□□□□ 0
CDC42EP1-201ENST00000249014 PSMG3-AS1Q96PY0 264 aa15.06■□□□□ 0
CDC42EP1-201ENST00000249014 TRBV7-1A0A0A6YYK4 115 aa15.05■□□□□ 0
CDC42EP1-201ENST00000249014 D6R8Y8 96 aa15.05■□□□□ 0
CDC42EP1-201ENST00000249014 ZNF207O43670 478 aaKnown RBP15.05■□□□□ 0
CDC42EP1-201ENST00000249014 G0S2P27469 103 aa15.05■□□□□ 0
CDC42EP1-201ENST00000249014 FAM104BQ5XKR9 115 aa15.05■□□□□ 0
CDC42EP1-201ENST00000249014 AP5S1Q9NUS5 200 aa15.05■□□□□ 0
CDC42EP1-201ENST00000249014 IGHV1-69DA0A0B4J2H0 117 aa15.05■□□□□ -0
CDC42EP1-201ENST00000249014 IGHV1-69P01742 117 aa15.05■□□□□ -0
CDC42EP1-201ENST00000249014 TSPOP30536 169 aa15.05■□□□□ -0
CDC42EP1-201ENST00000249014 BMI1P35226 326 aa15.05■□□□□ -0
CDC42EP1-201ENST00000249014 MCRIP2Q9BUT9 160 aaKnown RBP15.05■□□□□ -0
CDC42EP1-201ENST00000249014 MOB4Q9Y3A3 225 aa15.05■□□□□ -0
CDC42EP1-201ENST00000249014 TRAV40A0A0B4J280 105 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 C20orf202A1L168 122 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 IGLC6P0CF74 106 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 FAM106AQ4KMX7 169 aa15.04■□□□□ -0
CDC42EP1-201ENST00000249014 C19orf54Q5BKX5 351 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms