RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 ACACBO00763 2458 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 PLP1P60201 277 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 NDPQ00604 133 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
RAB3IP-201ENST00000247833 ZNF414Q96IQ9 312 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 NOTCH3Q9UM47 2321 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 SH2D1AO60880 128 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 UQCRFS1P47985 274 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 URB1-AS1Q96HZ7 61 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 TMEM14CQ9P0S9 112 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 RPL11P62913 178 aaKnown RBP9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 FBLN7Q53RD9 439 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 FAM120AOSQ5T036 256 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
RAB3IP-201ENST00000247833 RNF5Q99942 180 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 ASH1LQ9NR48 2969 aaKnown RBP9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 A0A087X0K7 114 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 PRTN3P24158 256 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 C15orf32Q32M92 178 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
RAB3IP-201ENST00000247833 HAX1O00165 279 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 IGLV2-11P01706 119 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 CLEC3BP05452 202 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 ERCC8Q13216 396 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 ZNF562Q6V9R5 426 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 FAM106CPP0CH98 169 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 PSG9Q00887 426 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 VGLL1Q99990 258 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 C1RLQ9NZP8 487 aa9.9□□□□□ -0.82
RAB3IP-201ENST00000247833 RHOGP84095 191 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 LY6DQ14210 128 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 NBL1P41271 181 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 NMUP48645 174 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 FAM106AQ4KMX7 169 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 ORMDL3Q8N138 153 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 FER1L6-AS1Q8NA97 138 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 EVI2AP22794 236 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 KLRB1Q12918 225 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 TMEM219Q86XT9 240 aa9.89□□□□□ -0.83
RAB3IP-201ENST00000247833 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 G3V318 75 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 CRIP1P50238 77 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 CSMD1Q96PZ7 3565 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 USP9YO00507 2555 aaPredicted RBP9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 CACNG7P62955 275 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 SAPCD1Q5SSQ6 148 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 ST20Q9HBF5 79 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 GOSR1O95249 250 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
RAB3IP-201ENST00000247833 LY6LH3BQJ8 138 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 PRSS1P07477 247 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 ZFP36P26651 326 aaKnown RBP9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 BMI1P35226 326 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 ADORA2A-AS1P86434 159 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 LYPD1Q8N2G4 141 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 OR11H6Q8NGC7 330 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 NEU4Q8WWR8 484 aaPredicted RBP9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 CFHR4Q92496 578 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
RAB3IP-201ENST00000247833 M0R1W7 72 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 EGR2P11161 476 aaPredicted RBP9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 TM4SF20Q53R12 229 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 PRR25Q96S07 402 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 MSRB1Q9NZV6 116 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 Q6AWC8 147 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 SIGLEC8Q9NYZ4 499 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 COX11Q9Y6N1 276 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 ATP6V0E1O15342 81 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 SAA4P35542 130 aa9.86□□□□□ -0.83
RAB3IP-201ENST00000247833 SORL1Q92673 2214 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 C12orf54Q6X4T0 127 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 SMIM15Q7Z3B0 74 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 NPIPB6E9PJ23 425 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 CCL25O15444 150 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 CTSGP08311 255 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 LY6EQ16553 131 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 MRPL51Q4U2R6 128 aaKnown RBP9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 S100A7P31151 101 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 RAB37Q96AX2 223 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 BPESC1Q9GZL8 116 aa9.85□□□□□ -0.83
RAB3IP-201ENST00000247833 DCHS2Q6V1P9 2916 aa9.84□□□□□ -0.83
RAB3IP-201ENST00000247833 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
RAB3IP-201ENST00000247833 GAGE1Q13065 139 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms