RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ARL3P36405 182 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 C1orf194Q5T5A4 169 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 GDF5OSQ5U4N7 250 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 METTL26Q96S19 204 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 CR1P17927 2039 aa14.23□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV3OR16-13A0A075B7E8 117 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV3-74A0A0B4J1X5 117 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 CHEK1O14757 476 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 CRIP1P50238 77 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 CFHR3Q02985 330 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 GFRA4Q9GZZ7 299 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 IGKV2-40A0A087WW87 121 aaPredicted RBP14.22□□□□□ -0.13
HOXC11-201ENST00000243082 IGKV2D-40P01614 121 aaPredicted RBP14.22□□□□□ -0.13
HOXC11-201ENST00000243082 KIAA1644Q3SXP7 199 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 OR4B1Q8NGF8 309 aa14.22□□□□□ -0.13
HOXC11-201ENST00000243082 APCP25054 2843 aa14.21□□□□□ -0.13
HOXC11-201ENST00000243082 IGHV3-49A0A0A0MS15 119 aa14.21□□□□□ -0.13
HOXC11-201ENST00000243082 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.21□□□□□ -0.13
HOXC11-201ENST00000243082 A0A1B0GXF2 115 aa14.21□□□□□ -0.13
HOXC11-201ENST00000243082 PF4V1P10720 104 aa14.21□□□□□ -0.13
HOXC11-201ENST00000243082 C8orf49Q96NF6 230 aa14.21□□□□□ -0.13
HOXC11-201ENST00000243082 ZNF705FA8MVS1 300 aaPredicted RBP14.2□□□□□ -0.14
HOXC11-201ENST00000243082 LINC00310P59036 64 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 Q0VG73 95 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 ATP5L2Q7Z4Y8 100 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 KRTAP1-3Q8IUG1 177 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 ZNF580Q9UK33 172 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 TENM4Q6N022 2769 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 FAM231BA6NCW3 169 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 IGHV3-11P01762 117 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 SLAQ13239 276 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 LCN12Q6JVE5 192 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 CDPF1Q6NVV7 123 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 LCNL1Q6ZST4 164 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 OR2D3Q8NGH3 330 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 Q96MF0 132 aa14.2□□□□□ -0.14
HOXC11-201ENST00000243082 APCSP02743 223 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 TMEM95Q3KNT9 176 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 UNQ9165/PRO28630Q6UXU0 137 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 C9orf139Q6ZV77 190 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 TMEM18Q96B42 140 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 NDUFA4O00483 81 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 GZMBP10144 247 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 RBPMS2Q6ZRY4 209 aaKnown RBP14.19□□□□□ -0.14
HOXC11-201ENST00000243082 COX8CQ7Z4L0 72 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 PGLYRP4Q96LB8 373 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 VGLL1Q99990 258 aa14.19□□□□□ -0.14
HOXC11-201ENST00000243082 F2Z2F3 143 aa14.18□□□□□ -0.14
HOXC11-201ENST00000243082 OR4X2Q8NGF9 303 aa14.18□□□□□ -0.14
HOXC11-201ENST00000243082 NBPF19A0A087WUL8 3843 aa14.18□□□□□ -0.14
HOXC11-201ENST00000243082 FBLL1A6NHQ2 334 aaKnown RBP14.17□□□□□ -0.14
HOXC11-201ENST00000243082 ESDP10768 282 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 CAMPP49913 170 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 FOXA3P55318 350 aaPredicted RBP14.17□□□□□ -0.14
HOXC11-201ENST00000243082 PRSS57Q6UWY2 283 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 RNF182Q8N6D2 247 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 OR5R1Q8NH85 324 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 PRR25Q96S07 402 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 SLC50A1Q9BRV3 221 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 A0A0G2JLM5 398 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 SERF1AO75920 110 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 SAPCD1Q5SSQ6 148 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 Q6YL49 198 aa14.17□□□□□ -0.14
HOXC11-201ENST00000243082 TRAV8-2A0A0B4J237 113 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 PRAC2D3DTV9 90 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 SRIP30626 198 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 HBBP68871 147 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 GLMPQ8WWB7 406 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 SSBP4Q9BWG4 385 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-201ENST00000243082 GSN-AS1Q9NRJ2 163 aa14.16□□□□□ -0.14
HOXC11-201ENST00000243082 PRRC2AP48634 2157 aaKnown RBP14.16□□□□□ -0.14
HOXC11-201ENST00000243082 KMT2BQ9UMN6 2715 aaPredicted RBP14.16□□□□□ -0.14
HOXC11-201ENST00000243082 CT45A10P0DMU9 189 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 S100A12P80511 92 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 JOSD1Q15040 202 aaPredicted RBP14.15□□□□□ -0.14
HOXC11-201ENST00000243082 OR10J3Q5JRS4 329 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 BAGE3Q86Y29 109 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 Q8TAT8 98 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 SMAD7O15105 426 aaKnown RBP14.15□□□□□ -0.14
HOXC11-201ENST00000243082 C8orf86Q6ZUL3 223 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 VPREB3Q9UKI3 123 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 MXRA5Q9NR99 2828 aa14.15□□□□□ -0.14
HOXC11-201ENST00000243082 A8MWP6 167 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 PSMB8P28062 276 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 ERCC8Q13216 396 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 DNLZQ5SXM8 178 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 HIST2H2BCQ6DN03 193 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 TEX15Q9BXT5 2789 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 PLA2G2AP14555 144 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 CYB5R2Q6BCY4 276 aa14.14□□□□□ -0.15
HOXC11-201ENST00000243082 RBAKDNA6NC62 111 aa14.13□□□□□ -0.15
HOXC11-201ENST00000243082 SH2D1AO60880 128 aa14.13□□□□□ -0.15
HOXC11-201ENST00000243082 FAM209BQ5JX69 171 aa14.13□□□□□ -0.15
HOXC11-201ENST00000243082 FAM162BQ5T6X4 162 aa14.13□□□□□ -0.15
HOXC11-201ENST00000243082 HAX1O00165 279 aa14.12□□□□□ -0.15
HOXC11-201ENST00000243082 ZNF80P51504 273 aaPredicted RBP14.12□□□□□ -0.15
HOXC11-201ENST00000243082 C10orf99Q6UWK7 81 aa14.12□□□□□ -0.15
HOXC11-201ENST00000243082 NPFFR1Q9GZQ6 430 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms