RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 UBTD1Q9HAC8 227 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 IGLV11-55A0A075B6I3 123 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 IFI27P40305 119 aaPredicted RBP13.16□□□□□ -0.3
SSPN-201ENST00000242729 ERCC8Q13216 396 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 CT83Q5H943 113 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 PRSS3P2Q8NHM4 247 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 NCR2O95944 276 aa13.15□□□□□ -0.3
SSPN-201ENST00000242729 PRTN3P24158 256 aa13.15□□□□□ -0.3
SSPN-201ENST00000242729 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
SSPN-201ENST00000242729 D6R8Y8 96 aa13.15□□□□□ -0.3
SSPN-201ENST00000242729 G3V318 75 aa13.15□□□□□ -0.3
SSPN-201ENST00000242729 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.3
SSPN-201ENST00000242729 WI2-2373I1.2A0A1W2PRP0 233 aa13.15□□□□□ -0.31
SSPN-201ENST00000242729 HAX1O00165 279 aa13.15□□□□□ -0.31
SSPN-201ENST00000242729 SH2D1AO60880 128 aa13.15□□□□□ -0.31
SSPN-201ENST00000242729 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.31
SSPN-201ENST00000242729 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.31
SSPN-201ENST00000242729 NDUFA3O95167 84 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 MSRB1Q9NZV6 116 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 ODF3BA8MYP8 253 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 CTSGP08311 255 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
SSPN-201ENST00000242729 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 NPBQ8NG41 125 aa13.14□□□□□ -0.31
SSPN-201ENST00000242729 TMEM189A5PLL7 270 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
SSPN-201ENST00000242729 RNF5Q99942 180 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 ZFP30Q9Y2G7 519 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 SMAD5-AS1Q9Y6J3 95 aa13.13□□□□□ -0.31
SSPN-201ENST00000242729 IGHV7-81A0A0B4J1V7 117 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 GAS8-AS1O95177 125 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 EGR2P11161 476 aaPredicted RBP13.12□□□□□ -0.31
SSPN-201ENST00000242729 CSN1S1P47710 185 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 RIGQ13278 110 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 MAP1LC3CQ9BXW4 147 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 CLEC3BP05452 202 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 FA2HQ7L5A8 372 aa13.12□□□□□ -0.31
SSPN-201ENST00000242729 ORM1P02763 201 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
SSPN-201ENST00000242729 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
SSPN-201ENST00000242729 CSPG4Q6UVK1 2322 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 POLQO75417 2590 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 PAX2Q02962 417 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 TWIST1Q15672 202 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 C11orf71Q6IPW1 123 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 Q6ZQT7 251 aa13.11□□□□□ -0.31
SSPN-201ENST00000242729 A0A087X0K7 114 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 J3KRW8 73 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 OR5AL1P0C617 328 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 KLRB1Q12918 225 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 CLEC19AQ6UXS0 136 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 ZANQ9Y493 2812 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 NUDT3O95989 172 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 PKD1L2Q7Z442 2459 aa13.1□□□□□ -0.31
SSPN-201ENST00000242729 FBXL19-AS1Q494R0 122 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 M0R1W7 72 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 IGHG4P01861 327 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 SAA4P35542 130 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 RHOGP84095 191 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 FAM162BQ5T6X4 162 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 Q8N9W7 124 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 PRR25Q96S07 402 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
SSPN-201ENST00000242729 MYO18BQ8IUG5 2567 aa13.08□□□□□ -0.31
SSPN-201ENST00000242729 SPRY2O43597 315 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 TTC9CQ8N5M4 171 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 SIGLEC8Q9NYZ4 499 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 C20orf202A1L168 122 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 FAM231BA6NCW3 169 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 HSBP1L1C9JCN9 74 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 CCL25O15444 150 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 PRELID3AQ96N28 172 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 C18orf15Q96N68 181 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 TMEM191AQ9H0A3 160 aa13.08□□□□□ -0.32
SSPN-201ENST00000242729 TRAV30A0A087WSZ9 112 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 CBY3A6NI87 242 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 EVI2AP22794 236 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 PTTG1IPP53801 180 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 THYN1Q9P016 225 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
SSPN-201ENST00000242729 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 SRSF8Q9BRL6 282 aaKnown RBP13.07□□□□□ -0.32
SSPN-201ENST00000242729 ZFYVE26Q68DK2 2539 aa13.07□□□□□ -0.32
SSPN-201ENST00000242729 GATA1P15976 413 aaPredicted RBP13.06□□□□□ -0.32
SSPN-201ENST00000242729 RPL7P18124 248 aaKnown RBP13.06□□□□□ -0.32
SSPN-201ENST00000242729 MRPL51Q4U2R6 128 aaKnown RBP13.06□□□□□ -0.32
SSPN-201ENST00000242729 CCDC144NLQ6NUI1 221 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms