RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 AAMDCQ9H7C9 122 aa12.17□□□□□ -0.46
LIM2-201ENST00000221973 TEX46H3BTG2 121 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 HBE1P02100 147 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 UBE2G2P60604 165 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 CCL20P78556 96 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 PSG3Q16557 428 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 Q9H3A6 140 aa12.16□□□□□ -0.46
LIM2-201ENST00000221973 CSMD3Q7Z407 3707 aa12.15□□□□□ -0.46
LIM2-201ENST00000221973 TRAV1-1A0A0B4J248 108 aa12.15□□□□□ -0.46
LIM2-201ENST00000221973 ZNF705FA8MVS1 300 aaPredicted RBP12.15□□□□□ -0.46
LIM2-201ENST00000221973 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
LIM2-201ENST00000221973 STARD9Q9P2P6 4700 aa12.15□□□□□ -0.46
LIM2-201ENST00000221973 PGPA6NDG6 321 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 M0R3E3 92 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 OTORQ9NRC9 128 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 CLEC5AQ9NY25 188 aa12.14□□□□□ -0.47
LIM2-201ENST00000221973 F6UB75 175 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 IFITM2Q01629 132 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 ACTL10Q5JWF8 245 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 RPUSD4Q96CM3 377 aaKnown RBP12.13□□□□□ -0.47
LIM2-201ENST00000221973 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 PRELID1Q9Y255 219 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
LIM2-201ENST00000221973 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
LIM2-201ENST00000221973 LYSTQ99698 3801 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 A0A1W2PRE2 83 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 FAM74A7A6NL05 159 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 PAGE4O60829 102 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 ZNF705DP0CH99 300 aaPredicted RBP12.12□□□□□ -0.47
LIM2-201ENST00000221973 ZNF705BP0CI00 300 aaPredicted RBP12.12□□□□□ -0.47
LIM2-201ENST00000221973 SUMO1P63165 101 aaKnown RBP12.12□□□□□ -0.47
LIM2-201ENST00000221973 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
LIM2-201ENST00000221973 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
LIM2-201ENST00000221973 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
LIM2-201ENST00000221973 IGHV4-30-4P0DP06 118 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 PPT1P50897 306 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 SAV1Q9H4B6 383 aaPredicted RBP12.11□□□□□ -0.47
LIM2-201ENST00000221973 RPH3ALQ9UNE2 315 aa12.11□□□□□ -0.47
LIM2-201ENST00000221973 CSN1S1P47710 185 aa12.1□□□□□ -0.47
LIM2-201ENST00000221973 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
LIM2-201ENST00000221973 STHQ8IWL8 128 aa12.1□□□□□ -0.47
LIM2-201ENST00000221973 A0A0J9YX75 114 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 NMBP08949 121 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 RPL35AP18077 110 aaKnown RBP12.09□□□□□ -0.47
LIM2-201ENST00000221973 ATP5G3P48201 142 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 GNG5P63218 68 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 HIST1H1AQ02539 215 aaPredicted RBP12.09□□□□□ -0.47
LIM2-201ENST00000221973 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 LYPD6BQ8NI32 183 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 RXFP4Q8TDU9 374 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 MANBALQ9NQG1 85 aa12.09□□□□□ -0.47
LIM2-201ENST00000221973 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 H3BMM0 161 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 IFNA1P01562 189 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 FRMD6-AS1P0C7T7 363 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 HLA-DRB4P13762 266 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 RAB14P61106 215 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 HAGHQ16775 308 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 C5orf17Q8NAS9 161 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 OR4B1Q8NGF8 309 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 OR10J6PQ8NGY7 276 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 RCHY1Q96PM5 261 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 NKX6-2Q9C056 277 aaPredicted RBP12.08□□□□□ -0.48
LIM2-201ENST00000221973 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 HLA-DRB4X5D2U9 266 aa12.08□□□□□ -0.48
LIM2-201ENST00000221973 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
LIM2-201ENST00000221973 DUSP14O95147 198 aaKnown RBP12.07□□□□□ -0.48
LIM2-201ENST00000221973 ERCC8Q13216 396 aa12.07□□□□□ -0.48
LIM2-201ENST00000221973 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
LIM2-201ENST00000221973 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
LIM2-201ENST00000221973 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
LIM2-201ENST00000221973 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
LIM2-201ENST00000221973 EPPK1P58107 5090 aaKnown RBP12.06□□□□□ -0.48
LIM2-201ENST00000221973 LOC102724200A0A096LPH7 203 aaPredicted RBP12.06□□□□□ -0.48
LIM2-201ENST00000221973 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
LIM2-201ENST00000221973 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
LIM2-201ENST00000221973 GOLT1AQ6ZVE7 132 aa12.06□□□□□ -0.48
LIM2-201ENST00000221973 A8MZ25 164 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms