RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 RNF182Q8N6D2 247 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 TMEM170AQ8WVE7 144 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 SMIM12Q96EX1 92 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 LIME1Q9H400 295 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 MALRD1Q5VYJ5 2156 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 RHODO00212 210 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 VCYO14598 125 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 TMEM75Q8N9X5 138 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 OR5A1Q8NGJ0 315 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 TRBV19A0A075B6N1 114 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 FABP2P12104 132 aa8.23□□□□□ -1.09
NIPAL3-201ENST00000003912 OBSL1O75147 1896 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 WISP2O76076 250 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 ADMP35318 185 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 LAGE3Q14657 143 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 DMRT1Q9Y5R6 373 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 ACACBO00763 2458 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 H3BRN7 92 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 ZNF843Q8N446 348 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 RBMY1BA6NDE4 496 aaKnown RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 RBMY1EA6NEQ0 496 aaKnown RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 RBMY1DP0C7P1 496 aaKnown RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 RBMY1A1P0DJD3 496 aaKnown RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 RBMY1CP0DJD4 496 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 C9orf66Q5T8R8 295 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 FGF23Q9GZV9 251 aaPredicted RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 NPBQ8NG41 125 aa8.22□□□□□ -1.09
NIPAL3-201ENST00000003912 F5H768 121 aa8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 HOXD3P31249 432 aaPredicted RBP8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 CDKN1BP46527 198 aa8.21□□□□□ -1.09
NIPAL3-201ENST00000003912 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
NIPAL3-201ENST00000003912 LOXL1Q08397 574 aaPredicted RBP8.21□□□□□ -1.1
NIPAL3-201ENST00000003912 SERF1AO75920 110 aa8.21□□□□□ -1.1
NIPAL3-201ENST00000003912 THAP8Q8NA92 274 aa8.21□□□□□ -1.1
NIPAL3-201ENST00000003912 DPM2O94777 84 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 PFN1P07737 140 aaKnown RBP8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 SEC11AP67812 179 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 A0A1B0GV90 55 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 D6R8Y8 96 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 IGHV1OR15-1A0A075B7D0 117 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 DDTP30046 118 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 PAX9P55771 341 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 CKS1BP61024 79 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 MS4A6AQ9H2W1 248 aa8.2□□□□□ -1.1
NIPAL3-201ENST00000003912 NCR2O95944 276 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 SMPXQ9UHP9 88 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 SLC25A2Q9BXI2 301 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 A0A087WWL8 130 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 TRBV7-9A0A0J9YWB2 115 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 IGLC7A0M8Q6 106 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 GHRHP01286 108 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 GUSBP1Q15486 140 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 C19orf84I3L1E1 186 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 ZFP36P26651 326 aaKnown RBP8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 NIT1Q86X76 327 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 TMEM95Q3KNT9 176 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 TMEM158Q8WZ71 300 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 ST6GALNAC6Q969X2 333 aa8.19□□□□□ -1.1
NIPAL3-201ENST00000003912 IGHV7-81A0A0B4J1V7 117 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 TMEM86BQ8N661 226 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 CREBBPQ92793 2442 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 TRBV24-1A0A075B6N3 115 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 A8MWV9 139 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 AZU1P20160 251 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 BLCAPP62952 87 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 CSTL1Q9H114 145 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 LSM4Q9Y4Z0 139 aaKnown RBP8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 PIEZO1Q92508 2521 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
NIPAL3-201ENST00000003912 LINC00587B1AMM8 73 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 SMIM13P0DJ93 91 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 MORN3Q6PF18 240 aaPredicted RBP8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
NIPAL3-201ENST00000003912 LAMTOR2Q9Y2Q5 125 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms