RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
SCN8A-214ENST00000637709 YPEL3P61236 119 aaPredicted RBP11.92□□□□□ -0.5
SCN8A-214ENST00000637709 GPR82Q96P67 336 aa11.92□□□□□ -0.5
SCN8A-214ENST00000637709 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
SCN8A-214ENST00000637709 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 FABP1P07148 127 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 CAMPP49913 170 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 TOMM20LQ6UXN7 152 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 POLR3KQ9Y2Y1 108 aaPredicted RBP11.91□□□□□ -0.5
SCN8A-214ENST00000637709 MOB4Q9Y3A3 225 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 HIGD1CA8MV81 97 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 NDUFS8O00217 210 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 NEU1Q99519 415 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 TMEM14CQ9P0S9 112 aa11.91□□□□□ -0.5
SCN8A-214ENST00000637709 ACANP16112 2415 aa11.9□□□□□ -0.5
SCN8A-214ENST00000637709 CR1P17927 2039 aa11.9□□□□□ -0.5
SCN8A-214ENST00000637709 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.5
SCN8A-214ENST00000637709 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.5
SCN8A-214ENST00000637709 Q86TA4 180 aa11.9□□□□□ -0.5
SCN8A-214ENST00000637709 NUP35Q8NFH5 326 aa11.9□□□□□ -0.5
SCN8A-214ENST00000637709 SMAD5-AS1Q9Y6J3 95 aa11.9□□□□□ -0.5
SCN8A-214ENST00000637709 SETD2Q9BYW2 2564 aaPredicted RBP11.9□□□□□ -0.5
SCN8A-214ENST00000637709 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 TGFAP01135 160 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 LTAP01374 205 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 RNF182Q8N6D2 247 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 Q8TAT8 98 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 TP53TG3Q9ULZ0 132 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 GDF5OSQ5U4N7 250 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
SCN8A-214ENST00000637709 B4DSR2 109 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 SLAQ13239 276 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 ZC2HC1AQ96GY0 325 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 TRGV3P03979 118 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 PGLYRP4Q96LB8 373 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 GSN-AS1Q9NRJ2 163 aa11.88□□□□□ -0.51
SCN8A-214ENST00000637709 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 LINC00310P59036 64 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 GTSF1Q8WW33 167 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 TMSB15BA0A087X1C1 80 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 TPPP2P59282 170 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 C10orf99Q6UWK7 81 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
SCN8A-214ENST00000637709 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 P01737 135 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 MUC21Q5SSG8 566 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 SERF1AO75920 110 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 CRISP2P16562 243 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 DUX5Q96PT3 197 aa11.86□□□□□ -0.51
SCN8A-214ENST00000637709 CLPSL1A2RUU4 121 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 PAX1P15863 534 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 IQCJQ1A5X6 159 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 DEFB112Q30KQ8 113 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 ZNF48Q96MX3 618 aaPredicted RBP11.85□□□□□ -0.51
SCN8A-214ENST00000637709 RCHY1Q96PM5 261 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 MEGF9Q9H1U4 602 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 RPP21Q9H633 154 aaKnown RBP11.85□□□□□ -0.51
SCN8A-214ENST00000637709 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 BMPR1BO00238 502 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 SRIP30626 198 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 VN1R17PQ8TDU5 208 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 DAZAP1Q96EP5 407 aaKnown RBP11.85□□□□□ -0.51
SCN8A-214ENST00000637709 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 VGLL1Q99990 258 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 AAMDCQ9H7C9 122 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 PSG8Q9UQ74 426 aa11.85□□□□□ -0.51
SCN8A-214ENST00000637709 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 PF4V1P10720 104 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 CRIP1P50238 77 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 ATP5G2Q06055 141 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 ZNF331Q9NQX6 463 aaPredicted RBP11.84□□□□□ -0.51
SCN8A-214ENST00000637709 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
SCN8A-214ENST00000637709 PRAC2D3DTV9 90 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 ERCC8Q13216 396 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
SCN8A-214ENST00000637709 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms