RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 PSMG3Q9BT73 122 aaPredicted RBP12.75□□□□□ -0.37
CLN6-218ENST00000637223 SH3BGRL3Q9H299 93 aa12.75□□□□□ -0.37
CLN6-218ENST00000637223 UMAD1C9J7I0 102 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 H3BTX0 84 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 ID1P41134 155 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 MEOX2P50222 304 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
CLN6-218ENST00000637223 A0A087X0K7 114 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLN6-218ENST00000637223 PSMB3P49720 205 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 RAB2AP61019 212 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 SERF2P84101 59 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 ACOT6Q3I5F7 207 aaPredicted RBP12.73□□□□□ -0.37
CLN6-218ENST00000637223 IGFL4Q6B9Z1 124 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 ALKAL2Q6UX46 152 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
CLN6-218ENST00000637223 SLC25A2Q9BXI2 301 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 MRPL32Q9BYC8 188 aaKnown RBP12.73□□□□□ -0.37
CLN6-218ENST00000637223 FUT9Q9Y231 359 aa12.73□□□□□ -0.37
CLN6-218ENST00000637223 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 H3BQ15 152 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 ISLRO14498 428 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 RPL35AP18077 110 aaKnown RBP12.72□□□□□ -0.37
CLN6-218ENST00000637223 M6PRP20645 277 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 SAMD13Q5VXD3 122 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 DPPA3Q6W0C5 159 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
CLN6-218ENST00000637223 SBSPONQ8IVN8 264 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 OR2G3Q8NGZ4 309 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 FAM167A-AS1Q96KT0 104 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
CLN6-218ENST00000637223 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.37
CLN6-218ENST00000637223 TRAV8-2A0A0B4J237 113 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 PYYP10082 97 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 SULT1A2P50226 295 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 DEFB1P60022 68 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 RHOBP62745 196 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 FAM122CQ6P4D5 195 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 RNF182Q8N6D2 247 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 MED9Q9NWA0 146 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 TMEM14CQ9P0S9 112 aa12.71□□□□□ -0.37
CLN6-218ENST00000637223 TENM3Q9P273 2699 aa12.71□□□□□ -0.38
CLN6-218ENST00000637223 DNAH9Q9NYC9 4486 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 HLA-DMBP28068 263 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 HAGHQ16775 308 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 LCN15Q6UWW0 184 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 ZNF586Q9NXT0 402 aa12.7□□□□□ -0.38
CLN6-218ENST00000637223 SLC17A3O00476 420 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 OR7C2O60412 319 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 NMBP08949 121 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 BLOC1S1P78537 153 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 STHQ8IWL8 128 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 WWC2-AS2Q96NR7 200 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 OR51M1Q9H341 326 aa12.69□□□□□ -0.38
CLN6-218ENST00000637223 A0A1W2PPV4 95 aa12.68□□□□□ -0.38
CLN6-218ENST00000637223 MBP02144 154 aa12.68□□□□□ -0.38
CLN6-218ENST00000637223 OR10J4P0C629 311 aa12.68□□□□□ -0.38
CLN6-218ENST00000637223 HIST1H1EP10412 219 aaKnown RBP12.68□□□□□ -0.38
CLN6-218ENST00000637223 BLNKQ8WV28 456 aa12.68□□□□□ -0.38
CLN6-218ENST00000637223 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
CLN6-218ENST00000637223 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
CLN6-218ENST00000637223 LINC00862A6NCI5 91 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 F6UB75 175 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 HMGB3O15347 200 aaKnown RBP12.67□□□□□ -0.38
CLN6-218ENST00000637223 PRB4P10163 310 aaPredicted RBP12.67□□□□□ -0.38
CLN6-218ENST00000637223 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
CLN6-218ENST00000637223 TAS2R45P59539 299 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 GUK1Q16774 197 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 KHDC3LQ587J8 217 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 RPP25LQ8N5L8 163 aaKnown RBP12.67□□□□□ -0.38
CLN6-218ENST00000637223 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 RPRMQ9NS64 109 aa12.67□□□□□ -0.38
CLN6-218ENST00000637223 TRBV19A0A075B6N1 114 aa12.66□□□□□ -0.38
CLN6-218ENST00000637223 APOC4P55056 127 aa12.66□□□□□ -0.38
CLN6-218ENST00000637223 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
CLN6-218ENST00000637223 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
CLN6-218ENST00000637223 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
CLN6-218ENST00000637223 FXYD5Q96DB9 178 aa12.66□□□□□ -0.38
CLN6-218ENST00000637223 SAV1Q9H4B6 383 aaPredicted RBP12.66□□□□□ -0.38
CLN6-218ENST00000637223 IGKV3-20P01619 116 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 HLA-DRB4P13762 266 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 UBE2L3P68036 154 aaKnown RBP12.65□□□□□ -0.38
CLN6-218ENST00000637223 PSG3Q16557 428 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 AKR1C8PQ5T2L2 129 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 RETNQ9HD89 108 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.38
CLN6-218ENST00000637223 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
CLN6-218ENST00000637223 H3BMM0 161 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms