RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 TNRC6AQ8NDV7 1962 aaKnown RBP5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 NCKAP5O14513 1909 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 IGKV1-6A0A0C4DH72 117 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 C5orf49A4QMS7 147 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 OR5H1A6NKK0 313 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 IFITM10A6NMD0 228 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 SYNGR2O43760 224 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 SERF1AO75920 110 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 TRGC2P03986 189 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 PSG2P11465 335 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 CTRLP40313 264 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 SERF2P84101 59 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 LCN15Q6UWW0 184 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 C11orf53Q8IXP5 236 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 OR2D3Q8NGH3 330 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 OR5A2Q8NGI9 324 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 ABHD3Q8WU67 409 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 MBD3L1Q8WWY6 194 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 SCRT2Q9NQ03 307 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 RNF7Q9UBF6 113 aa5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 BOKQ9UMX3 212 aaPredicted RBP5.44□□□□□ -1.54
SMARCA2-243ENST00000635590 DYSFO75923 2080 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 CREBBPQ92793 2442 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 TEP1Q99973 2627 aaKnown RBP5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 TRBV24-1A0A075B6N3 115 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 MAP1LC3B2A6NCE7 125 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 CEBPZOSA8MTT3 80 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 IFNA10P01566 189 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 TRGC1P0CF51 173 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 IAPPP10997 89 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 REG1BP48304 166 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 ZNF880Q6PDB4 577 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 ZNF525Q8N782 197 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 RDH5Q92781 318 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 MAP1LC3BQ9GZQ8 125 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 FGF23Q9GZV9 251 aaPredicted RBP5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 RPRMQ9NS64 109 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 RBM7Q9Y580 266 aaKnown RBP5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 MPC1Q9Y5U8 109 aa5.43□□□□□ -1.54
SMARCA2-243ENST00000635590 SHANK1Q9Y566 2161 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 IGKV3D-15A0A087WSY6 115 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 SOD3P08294 240 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 METTL15P1P0C7V9 234 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 CCL4P13236 92 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 FABP4P15090 132 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 HIST1H1BP16401 226 aaKnown RBP5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 HERVK_113P61574 105 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 PKIAP61925 76 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 GNG3P63215 75 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 OR5P3Q8WZ94 311 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 FRZBQ92765 325 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 KCNS1Q96KK3 526 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 NAT8Q9UHE5 227 aa5.42□□□□□ -1.54
SMARCA2-243ENST00000635590 IGHV6-1A0A0B4J1U7 121 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 UBE2L5PA0A1B0GUS4 154 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 RPL23P62829 140 aaKnown RBP5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SLC38A11Q08AI6 406 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 ADIRFQ15847 76 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 IGFBP7Q16270 282 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 CYP2G1PQ6ZSU1 146 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SMIM7Q9BQ49 75 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 WDR61Q9GZS3 305 aaKnown RBP5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 PSG11Q9UQ72 335 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 TIMM9Q9Y5J7 89 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 UPK2O00526 184 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SS18L1O75177 396 aaPredicted RBP5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 ZNF737O75373 536 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 HAND1O96004 215 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 REG1AP05451 166 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SERPINA7P05543 415 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 PSMB3P49720 205 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SPANXN5Q5MJ07 72 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 GFI1BQ5VTD9 330 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 MYPOPQ86VE0 399 aaPredicted RBP5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 Q8IYB0 196 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 RTL8AQ9BWD3 113 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 MANBALQ9NQG1 85 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 SLC39A9Q9NUM3 307 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 TRAPPC2LQ9UL33 140 aa5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
SMARCA2-243ENST00000635590 RTTNQ86VV8 2226 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 BOD1L1Q8NFC6 3051 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 COL27A1Q8IZC6 1860 aaPredicted RBP5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 H7BYZ3 331 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 IGKV1-39P01597 117 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 IGKV1-5P01602 117 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 IGKV1D-39P04432 117 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 CFC1P0CG37 223 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 FGF7P21781 194 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 DDTP30046 118 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 SPCS3P61009 180 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 MEF2BQ02080 365 aaPredicted RBP5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 MSMO1Q15800 293 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 TMEM241Q24JQ0 296 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 SPATA31B1PQ5VZV4 182 aa5.4□□□□□ -1.54
SMARCA2-243ENST00000635590 TGIF2LYQ8IUE0 185 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms