RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 GUSBP1Q15486 140 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 SSC4DQ8WTU2 575 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 SRSF4Q08170 494 aaKnown RBP10.36□□□□□ -0.75
SCN8A-209ENST00000627620 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 Q86TA4 180 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 RNF114Q9Y508 228 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 LYL1P12980 280 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 GBF1Q92538 1859 aa10.36□□□□□ -0.75
SCN8A-209ENST00000627620 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
SCN8A-209ENST00000627620 IGKV1-6A0A0C4DH72 117 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 TMEM158Q8WZ71 300 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 REG4Q9BYZ8 158 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 ROS1P08922 2347 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 ATP6V0E1O15342 81 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 BCL6BQ8N143 479 aaPredicted RBP10.35□□□□□ -0.75
SCN8A-209ENST00000627620 DEFB131AP59861 70 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 LINC00479Q96M42 142 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 ANK1P16157 1881 aa10.35□□□□□ -0.75
SCN8A-209ENST00000627620 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 C6orf226Q5I0X4 101 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 MAPK1IP1LQ8NDC0 245 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 LRRK1Q38SD2 2015 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 PDE6HQ13956 83 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 FAM110DQ8TAY7 271 aaPredicted RBP10.34□□□□□ -0.75
SCN8A-209ENST00000627620 TRAV13-1A0A0B4J241 112 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 GATA3P23771 443 aa10.34□□□□□ -0.75
SCN8A-209ENST00000627620 SBF1O95248 1867 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 C3orf79P0CE67 100 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 Q8TCH9 128 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 NAA38Q9BRA0 125 aaKnown RBP10.33□□□□□ -0.76
SCN8A-209ENST00000627620 TP53BP1Q12888 1972 aaPredicted RBP10.33□□□□□ -0.76
SCN8A-209ENST00000627620 LMO1P25800 156 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 Q5PR19 223 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 IL17RELQ6ZVW7 336 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 LIME1Q9H400 295 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 PSCAO43653 123 aa10.33□□□□□ -0.76
SCN8A-209ENST00000627620 LY6G6EA0A0G2JKS1 128 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 ETV2O00321 342 aaPredicted RBP10.32□□□□□ -0.76
SCN8A-209ENST00000627620 NDUFB8O95169 186 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 GATA4P43694 442 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 U3KQA8 63 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 A6NNC1 897 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 Q6ZR03 302 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 MRPL27Q9P0M9 148 aaKnown RBP10.32□□□□□ -0.76
SCN8A-209ENST00000627620 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 IGHV1-69P01742 117 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 PROK2Q9HC23 129 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 HEATR1Q9H583 2144 aaKnown RBP10.32□□□□□ -0.76
SCN8A-209ENST00000627620 C1orf194Q5T5A4 169 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 THSD7BQ9C0I4 1608 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 DKK1O94907 266 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 IGFL3Q6UXB1 125 aa10.32□□□□□ -0.76
SCN8A-209ENST00000627620 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
SCN8A-209ENST00000627620 NDUFA4L2Q9NRX3 87 aa10.31□□□□□ -0.76
SCN8A-209ENST00000627620 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
SCN8A-209ENST00000627620 A0A087X0K7 114 aa10.31□□□□□ -0.76
SCN8A-209ENST00000627620 G3V318 75 aa10.31□□□□□ -0.76
SCN8A-209ENST00000627620 KIAA2026Q5HYC2 2103 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 VWA8A3KMH1 1905 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 CFPP27918 469 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 YPEL3P61236 119 aaPredicted RBP10.3□□□□□ -0.76
SCN8A-209ENST00000627620 DUX4L9Q6RFH8 374 aaPredicted RBP10.3□□□□□ -0.76
SCN8A-209ENST00000627620 ZNF833PQ6ZTB9 187 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 SPXQ9BT56 116 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 XCL2Q9UBD3 114 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 CACNA1BQ00975 2339 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 TIMM21Q9BVV7 248 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 PHF3Q92576 2039 aaKnown RBP10.3□□□□□ -0.76
SCN8A-209ENST00000627620 IGHV2-70DA0A0C4DH43 119 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 LINC01619G3V211 115 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 LAMTOR3Q9UHA4 124 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 ABCA1O95477 2261 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 MYMXA0A1B0GTQ4 84 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 WISP1O95388 367 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 TNFRSF6BO95407 300 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 SS18Q15532 418 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 TMEM75Q8N9X5 138 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 GPR179Q6PRD1 2367 aa10.3□□□□□ -0.76
SCN8A-209ENST00000627620 CEACAM8P31997 349 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 Q96MF0 132 aa10.29□□□□□ -0.76
SCN8A-209ENST00000627620 MCRIP2Q9BUT9 160 aaKnown RBP10.29□□□□□ -0.76
SCN8A-209ENST00000627620 C17orf58Q2M2W7 97 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms