RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 ZNF331Q9NQX6 463 aaPredicted RBP7.39□□□□□ -1.23
USB1-216ENST00000624720 SPINK4O60575 86 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 DPM2O94777 84 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
USB1-216ENST00000624720 RTL8BQ17RB0 113 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 LINC01545Q5VT33 79 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 GPX7Q96SL4 187 aaPredicted RBP7.38□□□□□ -1.23
USB1-216ENST00000624720 GNG12Q9UBI6 72 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 SPTAN1Q13813 2472 aaKnown RBP7.38□□□□□ -1.23
USB1-216ENST00000624720 PIEZO1Q92508 2521 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 AMY1AP04745 511 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 LGALS1P09382 135 aaKnown RBP7.38□□□□□ -1.23
USB1-216ENST00000624720 SERF2P84101 59 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 CD164Q04900 197 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 ZNF493Q6ZR52 646 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 ZNF645Q8N7E2 425 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 PEMTQ9UBM1 199 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 IGHV3-64DA0A0J9YX35 117 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 C11orf94C9JXX5 98 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 TRACP01848 142 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 IGHG1P01857 330 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 KLF5Q13887 457 aaPredicted RBP7.38□□□□□ -1.23
USB1-216ENST00000624720 RRN3P1Q2M238 152 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 LYZL2Q7Z4W2 148 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 RND1Q92730 232 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 TTTY12Q9BZ98 90 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
USB1-216ENST00000624720 C5orf49A4QMS7 147 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 TEX22C9J3V5 150 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 NDUFB4O95168 129 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 PCSK4Q6UW60 755 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
USB1-216ENST00000624720 FAM19A4Q96LR4 140 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 DSCR8Q96T75 97 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 HEYLQ9NQ87 328 aaPredicted RBP7.37□□□□□ -1.23
USB1-216ENST00000624720 LY6LH3BQJ8 138 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 H7C1H1 209 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 OR5AL1P0C617 328 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 CRYGAP11844 174 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 FKBP2P26885 142 aaKnown RBP7.37□□□□□ -1.23
USB1-216ENST00000624720 SPACA3Q8IXA5 215 aa7.37□□□□□ -1.23
USB1-216ENST00000624720 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 C3orf85A0A1B0GTC6 90 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 CRYM-AS1A6NIL9 109 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 K7EM74 188 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 ELANEP08246 267 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 FAM57AQ8TBR7 257 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 MRPL53Q96EL3 112 aaKnown RBP7.36□□□□□ -1.23
USB1-216ENST00000624720 C11orf1Q9H5F2 150 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 TAS2R4Q9NYW5 299 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 DOCK11Q5JSL3 2073 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 A8MWV9 139 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 PRRG2O14669 202 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 PMAIP1Q13794 54 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 OR52N5Q8NH56 324 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
USB1-216ENST00000624720 DYSFO75923 2080 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 SSSCA1O60232 199 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 LEPP41159 167 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 GNB1P62873 340 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 MORN3Q6PF18 240 aaPredicted RBP7.35□□□□□ -1.23
USB1-216ENST00000624720 KCTD18Q6PI47 426 aaPredicted RBP7.35□□□□□ -1.23
USB1-216ENST00000624720 AAED1Q7RTV5 226 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 NABP1Q96AH0 204 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 ZNF71Q9NQZ8 489 aaPredicted RBP7.35□□□□□ -1.23
USB1-216ENST00000624720 LHFPL6Q9Y693 200 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 IGHV1-24A0A0C4DH33 117 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 FAM90A10PA6NDY2 464 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 AMY2BP19961 511 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 B3GALT5-AS1P59052 145 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 GGNQ86UU5 652 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 PRIMA1Q86XR5 153 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 FGFBP3Q8TAT2 258 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 GPHA2Q96T91 129 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 VKORC1Q9BQB6 163 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 PTPRQQ9UMZ3 2332 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 CPAMD8Q8IZJ3 1885 aa7.35□□□□□ -1.23
USB1-216ENST00000624720 TRAV2A0A0B4J234 112 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 Q6ZS49 121 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 C6orf201Q7Z4U5 140 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 TCRBV4S1A1TA0A5B7 111 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 SPINT2O43291 252 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 ECI1P42126 302 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 RSPO1Q2MKA7 263 aaPredicted RBP7.34□□□□□ -1.23
USB1-216ENST00000624720 C12orf74Q32Q52 190 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 ODF3Q96PU9 254 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 TMEM14AQ9Y6G1 99 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 NCOA6Q14686 2063 aaPredicted RBP7.34□□□□□ -1.23
USB1-216ENST00000624720 CADP27708 2225 aa7.34□□□□□ -1.23
USB1-216ENST00000624720 SHISA9B4DS77 424 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 NDUFC2O95298 119 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 CD69Q07108 199 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 MOB3BQ86TA1 216 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 LINC01561Q8N1V8 128 aa7.34□□□□□ -1.24
USB1-216ENST00000624720 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.24
USB1-216ENST00000624720 WFDC11Q8NEX6 87 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms