RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 FXYD7P58549 80 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 YPEL3P61236 119 aaPredicted RBP10.58□□□□□ -0.72
SIRPA-204ENST00000622179 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 Q86TA4 180 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
SIRPA-204ENST00000622179 KIAA1549Q9HCM3 1950 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 SLAQ13239 276 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 FAM74A4Q5TZK3 123 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 TANC2Q9HCD6 1990 aa10.58□□□□□ -0.72
SIRPA-204ENST00000622179 NAV3Q8IVL0 2385 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 PTPN13Q12923 2485 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 OOSP1A8MZH6 123 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 NPFFO15130 113 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 COL4A2P08572 1712 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 G3V318 75 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 PSG3Q16557 428 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 F2Z2F3 143 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 NCR2O95944 276 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 PAX8Q06710 450 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 C12orf54Q6X4T0 127 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 ERASQ7Z444 233 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 WFDC12Q8WWY7 111 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 PYGO2Q9BRQ0 406 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
SIRPA-204ENST00000622179 RUSC1-AS1Q66K80 236 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 DMRTC2Q8IXT2 367 aaPredicted RBP10.56□□□□□ -0.72
SIRPA-204ENST00000622179 LINC00469Q8N7U9 141 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
SIRPA-204ENST00000622179 A0A1B0GW15 77 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 FAM181BA6NEQ2 426 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 EVI2AP22794 236 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 EIF4EBP1Q13541 118 aaPredicted RBP10.56□□□□□ -0.72
SIRPA-204ENST00000622179 THAP8Q8NA92 274 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 C17orf77Q96MU5 243 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 CFAP54Q96N23 3096 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 TRAV9-2A0A087WT02 112 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 H3BUX3 64 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 ARMS2P0C7Q2 107 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 PATE2Q6UY27 113 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 SLC50A1Q9BRV3 221 aa10.56□□□□□ -0.72
SIRPA-204ENST00000622179 LOC102724200A0A096LPH7 203 aaPredicted RBP10.55□□□□□ -0.72
SIRPA-204ENST00000622179 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 C18orf32Q8TCD1 76 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
SIRPA-204ENST00000622179 LAMA1P25391 3075 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 D6R8Y8 96 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 ATP6V0E1O15342 81 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
SIRPA-204ENST00000622179 Q0VG73 95 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 Q6ZWC4 215 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 VCANP13611 3396 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 A6NDN8 102 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 A8MWP6 167 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 TRBV19A0A075B6N1 114 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 SH2D1AO60880 128 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
SIRPA-204ENST00000622179 A6NNC1 897 aa10.54□□□□□ -0.72
SIRPA-204ENST00000622179 NUPR1O60356 82 aa10.54□□□□□ -0.72
SIRPA-204ENST00000622179 GCSHP23434 173 aa10.54□□□□□ -0.72
SIRPA-204ENST00000622179 ERCC8Q13216 396 aa10.54□□□□□ -0.72
SIRPA-204ENST00000622179 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
SIRPA-204ENST00000622179 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
SIRPA-204ENST00000622179 RNF182Q8N6D2 247 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 C8orf31Q8N9H6 132 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 SRSF9Q13242 221 aaKnown RBP eCLIP10.53□□□□□ -0.72
SIRPA-204ENST00000622179 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 RCHY1Q96PM5 261 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 UBE2E1P51965 193 aa10.53□□□□□ -0.72
SIRPA-204ENST00000622179 SMKR1H3BMG3 65 aa10.52□□□□□ -0.72
SIRPA-204ENST00000622179 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.72
SIRPA-204ENST00000622179 LEPP41159 167 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 ASIPP42127 132 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
SIRPA-204ENST00000622179 EREGO14944 169 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 FOSL1P15407 271 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 ZNF491Q8N8L2 437 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 FOXC2Q99958 501 aa10.52□□□□□ -0.73
SIRPA-204ENST00000622179 MRPL27Q9P0M9 148 aaKnown RBP10.52□□□□□ -0.73
SIRPA-204ENST00000622179 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms